RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 CD209Q9NNX6 404 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 EMILIN3Q9NT22 766 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 KIAA1024Q9UPX6 916 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 TRAF3IP3Q9Y228 551 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 CASP4P49662 377 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 EIF6P56537 245 aaKnown RBP8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 ADAM9Q13443 819 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 TMC3Q7Z5M5 1100 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 NBPF5PQ86XG9 351 aaPredicted RBP8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 ZDHHC14Q8IZN3 488 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 NCAPGQ9BPX3 1015 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 CD248Q9HCU0 757 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 SEC63Q9UGP8 760 aaKnown RBP8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 AMACRQ9UHK6 382 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 FBXL5Q9UKA1 691 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 LEMD3Q9Y2U8 911 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 NOC2LQ9Y3T9 749 aaKnown RBP8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 ASTN1O14525 1302 aa8.15□□□□□ -1.11
PPARGC1A-217ENST00000613098 LOC102724159A0A0B4J2E5 919 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 A6NNZ2 444 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 hCG_1984214I3L0E3 225 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 DDX3YO15523 660 aaKnown RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 DAPK3O43293 454 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 BAG3O95817 575 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 SLC16A2P36021 539 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 TNNI2P48788 182 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ZNF543Q08ER8 600 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 SEPT2Q15019 361 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 PWP2Q15269 919 aaKnown RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 EDRF1Q3B7T1 1238 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 TUBB8Q3ZCM7 444 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 CCDC40Q4G0X9 1142 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 SOGA3Q5TF21 947 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 B4GALNT4Q76KP1 1039 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ZNF713Q8N859 430 aaPredicted RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 SETDB2Q96T68 719 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 CDCA7Q9BWT1 371 aaPredicted RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 MTFR1LQ9H019 292 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ADAMTSL1Q8N6G6 1762 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 PNMA6FA0A0J9YX94 578 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 POTEFA5A3E0 1075 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L15C9J2P7 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L10C9JJH3 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L13C9JLJ4 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L11C9JVI0 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L18D6R9N7 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L22D6RA61 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L17D6RBQ6 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L19D6RCP7 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L20D6RJB6 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 POTEIP0CG38 1075 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 PPATQ06203 517 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 PDE4CQ08493 712 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L24Q0WX57 530 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 GRAPQ13588 217 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 USP17L6PQ6QN14 398 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 POTEGQ6S5H5 508 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 POTEEQ6S8J3 1075 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 CATSPER3Q86XQ3 398 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 TEX11Q8IYF3 940 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ETNPPLQ8TBG4 499 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 GRAPLQ8TC17 118 aaPredicted RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 RAPGEF5Q92565 580 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ARHGEF1Q92888 912 aaKnown RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ZKSCAN4Q969J2 545 aaPredicted RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 SLC35C1Q96A29 364 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 TLCD1Q96CP7 247 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.14□□□□□ -1.112e-6■■□□□ 13.5
PPARGC1A-217ENST00000613098 ERVK-5Q9HDB9 667 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 GPCPD1Q9NPB8 672 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 OSGEPQ9NPF4 335 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 A1CFQ9NQ94 594 aaKnown RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ZDHHC18Q9NUE0 388 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 HDAC9Q9UKV0 1011 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 PCDHA12Q9UN75 941 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ZMYM2Q9UBW7 1377 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 CYP3A7-CYP3A51PA0A087WV96 503 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 RSPH10B2B2RC85 870 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 TTI1O43156 1089 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 RPS6KA4O75676 772 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 SHBGP04278 402 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 RSPH10BP0C881 870 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 CYP3A7P24462 503 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 HOXA7P31268 230 aaPredicted RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 HPDP32754 393 aaPredicted RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 IFT88Q13099 833 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 RPS6KA1Q15418 735 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ASIC2Q16515 512 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ALKBH5Q6P6C2 394 aaKnown RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 BARGINQ6ZT62 677 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 CALR3Q96L12 384 aaKnown RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 TSG101Q99816 390 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 NYXQ9GZU5 481 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 PPANQ9NQ55 473 aaKnown RBP8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 PCDHA3Q9Y5H8 950 aa8.14□□□□□ -1.11
PPARGC1A-217ENST00000613098 ATP8B3O60423 1300 aa8.13□□□□□ -1.11
PPARGC1A-217ENST00000613098 E7EVH7 732 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms