RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 VN1R2Q8NFZ6 395 aa26.89■■□□□ 1.9
MMP28-203ENST00000612672 CTCFLQ8NI51 663 aaPredicted RBP26.89■■□□□ 1.9
MMP28-203ENST00000612672 IGSF9BQ9UPX0 1349 aa26.89■■□□□ 1.89
MMP28-203ENST00000612672 MGEA5O60502 916 aa26.88■■□□□ 1.89
MMP28-203ENST00000612672 COASYQ13057 564 aa26.88■■□□□ 1.89
MMP28-203ENST00000612672 PLCB4Q15147 1175 aa26.88■■□□□ 1.89
MMP28-203ENST00000612672 TMEM266Q2M3C6 531 aa26.88■■□□□ 1.89
MMP28-203ENST00000612672 CYP2W1Q8TAV3 490 aa26.88■■□□□ 1.89
MMP28-203ENST00000612672 CDHR1Q96JP9 859 aa26.88■■□□□ 1.89
MMP28-203ENST00000612672 PSTPIP2Q9H939 334 aa26.88■■□□□ 1.89
MMP28-203ENST00000612672 JADE2Q9NQC1 790 aa26.88■■□□□ 1.89
MMP28-203ENST00000612672 SEC63Q9UGP8 760 aaKnown RBP26.88■■□□□ 1.89
MMP28-203ENST00000612672 USP15Q9Y4E8 981 aaPredicted RBP26.88■■□□□ 1.89
MMP28-203ENST00000612672 TMEM221A6NGB7 291 aa26.87■■□□□ 1.89
MMP28-203ENST00000612672 M0R296 226 aa26.87■■□□□ 1.89
MMP28-203ENST00000612672 SGSM2O43147 1006 aa26.87■■□□□ 1.89
MMP28-203ENST00000612672 SCG2P13521 617 aa26.87■■□□□ 1.89
MMP28-203ENST00000612672 TRIM67Q6ZTA4 783 aa26.87■■□□□ 1.89
MMP28-203ENST00000612672 CACNA1HO95180 2353 aa26.86■■□□□ 1.89
MMP28-203ENST00000612672 SH2B2O14492 632 aaPredicted RBP26.86■■□□□ 1.89
MMP28-203ENST00000612672 IBSPP21815 317 aaPredicted RBP26.86■■□□□ 1.89
MMP28-203ENST00000612672 SMARCA1P28370 1054 aa26.86■■□□□ 1.89
MMP28-203ENST00000612672 CBX2Q14781 532 aaPredicted RBP26.86■■□□□ 1.89
MMP28-203ENST00000612672 NAALADL2Q58DX5 795 aa26.86■■□□□ 1.89
MMP28-203ENST00000612672 BMP8AQ7Z5Y6 402 aa26.86■■□□□ 1.89
MMP28-203ENST00000612672 JPH1Q9HDC5 661 aaPredicted RBP26.86■■□□□ 1.89
MMP28-203ENST00000612672 PCDHA6Q9UN73 950 aa26.86■■□□□ 1.89
MMP28-203ENST00000612672 TRPC6Q9Y210 931 aa26.86■■□□□ 1.89
MMP28-203ENST00000612672 PCDHA8Q9Y5H6 950 aa26.86■■□□□ 1.89
MMP28-203ENST00000612672 SQORQ9Y6N5 450 aa26.86■■□□□ 1.89
MMP28-203ENST00000612672 RRN3P2A6NIE6 340 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 PRC1O43663 620 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 PPFIA3O75145 1194 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 PAK2Q13177 524 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 IER5Q5VY09 327 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 MAP4K1Q92918 833 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 PGBD1Q96JS3 809 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 FTHL17Q9BXU8 183 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 CELF4Q9BZC1 486 aaKnown RBP26.85■■□□□ 1.89
MMP28-203ENST00000612672 CDHR5Q9HBB8 845 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 SLC9A2Q9UBY0 812 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 PCDHA2Q9Y5H9 948 aa26.85■■□□□ 1.89
MMP28-203ENST00000612672 RBM8AQ9Y5S9 174 aaKnown RBP26.85■■□□□ 1.89
MMP28-203ENST00000612672 VPS13AQ96RL7 3174 aa26.84■■□□□ 1.89
MMP28-203ENST00000612672 PER2O15055 1255 aa26.84■■□□□ 1.89
MMP28-203ENST00000612672 KIF5BP33176 963 aa26.84■■□□□ 1.89
MMP28-203ENST00000612672 ZXDAP98168 799 aa26.84■■□□□ 1.89
MMP28-203ENST00000612672 TCF15Q12870 199 aa26.84■■□□□ 1.89
MMP28-203ENST00000612672 ITGB3BPQ13352 177 aaPredicted RBP26.84■■□□□ 1.89
MMP28-203ENST00000612672 TMEM40Q8WWA1 233 aa26.84■■□□□ 1.89
MMP28-203ENST00000612672 KCNH7Q9NS40 1196 aa26.84■■□□□ 1.89
MMP28-203ENST00000612672 ARP10275 920 aa26.83■■□□□ 1.89
MMP28-203ENST00000612672 ACTR2P61160 394 aa26.83■■□□□ 1.89
MMP28-203ENST00000612672 TYW1BQ6NUM6 668 aa26.83■■□□□ 1.89
MMP28-203ENST00000612672 CCDC82Q8N4S0 544 aa26.83■■□□□ 1.89
MMP28-203ENST00000612672 RUFY2Q8WXA3 655 aa26.83■■□□□ 1.89
MMP28-203ENST00000612672 LZTS2Q9BRK4 669 aa26.83■■□□□ 1.89
MMP28-203ENST00000612672 KDM3AQ9Y4C1 1321 aa26.83■■□□□ 1.89
MMP28-203ENST00000612672 PBXIP1Q96AQ6 731 aa26.82■■□□□ 1.88
MMP28-203ENST00000612672 MXRA8Q9BRK3 442 aa26.82■■□□□ 1.88
MMP28-203ENST00000612672 ERVK-5Q9HDB9 667 aa26.82■■□□□ 1.88
MMP28-203ENST00000612672 NOC2LQ9Y3T9 749 aaKnown RBP26.82■■□□□ 1.88
MMP28-203ENST00000612672 ZFHX2Q9C0A1 2572 aaPredicted RBP26.82■■□□□ 1.88
MMP28-203ENST00000612672 SPDYE3A6NKU9 549 aa26.81■■□□□ 1.88
MMP28-203ENST00000612672 STAG3L1P0CL83 205 aa26.81■■□□□ 1.88
MMP28-203ENST00000612672 SARSP49591 514 aaKnown RBP26.81■■□□□ 1.88
MMP28-203ENST00000612672 ERVFC1P60507 584 aa26.81■■□□□ 1.88
MMP28-203ENST00000612672 FAM102BQ5T8I3 360 aa26.81■■□□□ 1.88
MMP28-203ENST00000612672 MTHFD1LQ6UB35 978 aa26.81■■□□□ 1.88
MMP28-203ENST00000612672 ATP8B4Q8TF62 1192 aa26.81■■□□□ 1.88
MMP28-203ENST00000612672 SUSD6Q92537 303 aa26.81■■□□□ 1.88
MMP28-203ENST00000612672 PPP2R3CQ969Q6 453 aa26.81■■□□□ 1.88
MMP28-203ENST00000612672 LRRC2Q9BYS8 371 aa26.81■■□□□ 1.88
MMP28-203ENST00000612672 SMIM35A0A1B0GVV1 85 aa26.8■■□□□ 1.88
MMP28-203ENST00000612672 VCPP55072 806 aaKnown RBP26.8■■□□□ 1.88
MMP28-203ENST00000612672 KRT76Q01546 638 aa26.8■■□□□ 1.88
MMP28-203ENST00000612672 TMTC3Q6ZXV5 915 aa26.8■■□□□ 1.88
MMP28-203ENST00000612672 RPGRIP1Q96KN7 1286 aa26.8■■□□□ 1.88
MMP28-203ENST00000612672 AZI2Q9H6S1 392 aa26.8■■□□□ 1.88
MMP28-203ENST00000612672 TLE6Q9H808 572 aa26.8■■□□□ 1.88
MMP28-203ENST00000612672 WDR81Q562E7 1941 aa26.8■■□□□ 1.88
MMP28-203ENST00000612672 PLXNA3P51805 1871 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 M0QZ92 97 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 CCNE2O96020 404 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 GNAQP50148 359 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 STAT5BP51692 787 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 NFX1Q12986 1120 aaKnown RBP26.79■■□□□ 1.88
MMP28-203ENST00000612672 WWC2Q6AWC2 1192 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 CASC1Q6TDU7 716 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 NFXL1Q6ZNB6 911 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 PLPPR4Q7Z2D5 763 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 HEATR3Q7Z4Q2 680 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 ASIC4Q96FT7 647 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 PHF7Q9BWX1 381 aaPredicted RBP26.79■■□□□ 1.88
MMP28-203ENST00000612672 LRFN2Q9ULH4 789 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 NFASCO94856 1347 aa26.79■■□□□ 1.88
MMP28-203ENST00000612672 TBKBP1A7MCY6 615 aa26.78■■□□□ 1.88
MMP28-203ENST00000612672 MAFGO15525 162 aa26.78■■□□□ 1.88
MMP28-203ENST00000612672 ATG7O95352 703 aa26.78■■□□□ 1.88
MMP28-203ENST00000612672 RPLP2P05387 115 aaKnown RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms