RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 COBLL1Q53SF7 1204 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 MIER3Q7Z3K6 550 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 TPH2Q8IWU9 490 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 DRC7Q8IY82 874 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 SYT2Q8N9I0 419 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 NELFBQ8WX92 580 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 DNAJC19Q96DA6 116 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 DHTKD1Q96HY7 919 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 DYDC2Q96IM9 177 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CDHR1Q96JP9 859 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 INPP4AQ96PE3 977 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 MOV10L1Q9BXT6 1211 aaKnown RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 NMRK2Q9NPI5 230 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 RGL1Q9NZL6 768 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 IFNKQ9P0W0 207 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CTNND2Q9UQB3 1225 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CBFA2T2O43439 604 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 TLL1O43897 1013 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 PEX10O60683 326 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 S1PR4O95977 384 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 ADH1BP00325 375 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 SERPINC1P01008 464 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 ZBTB48P10074 688 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 IDEP14735 1019 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CYP11B2P19099 503 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 ERCC3P19447 782 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 STX17P56962 302 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 UBASH3AP57075 661 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 PSMC6P62333 389 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 EHHADHQ08426 723 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 STK4Q13043 487 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 ITGB3BPQ13352 177 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 TPD52L1Q16890 204 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 GPBP1Q86WP2 473 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CCDC65Q8IXS2 484 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 SPC24Q8NBT2 197 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 NACC1Q96RE7 527 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 TXNRD2Q9NNW7 524 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 SAMSN1Q9NSI8 373 aaKnown RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 PANK4Q9NVE7 773 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 PKD2L1Q9P0L9 805 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 ADD3Q9UEY8 706 aaKnown RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 MAPK8IP1Q9UQF2 711 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 ADGRG1Q9Y653 693 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CCL15-CCL14A0A0B4J2E2 113 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 RCCD1A6NED2 376 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 FAM187AA6NFU0 413 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 B4DLN1 442 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 DDX39AO00148 427 aaKnown RBP9.91□□□□□ -0.82
CCDC47-207ENST00000612558 ATP9AO75110 1047 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 EIF3JO75822 258 aaKnown RBP9.91□□□□□ -0.82
CCDC47-207ENST00000612558 KRT18P05783 430 aaKnown RBP9.91□□□□□ -0.82
CCDC47-207ENST00000612558 P4HBP07237 508 aaKnown RBP9.91□□□□□ -0.82
CCDC47-207ENST00000612558 FCER1AP12319 257 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 KRT76Q01546 638 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 CNTN2Q02246 1040 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 STXBP2Q15833 593 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 CCL15Q16663 113 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 Q3C1V9 767 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 GNPTABQ3T906 1256 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 ARSHQ5FYA8 562 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 XPO4Q9C0E2 1151 aaKnown RBP9.91□□□□□ -0.82
CCDC47-207ENST00000612558 BHMT2Q9H2M3 363 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 MROH8Q9H579 483 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 SLC39A2Q9NP94 309 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 TCEAL9Q9UHQ7 104 aa9.91□□□□□ -0.82
CCDC47-207ENST00000612558 KIAA1217Q5T5P2 1943 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 NFASCO94856 1347 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 BICDL2A1A5D9 508 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 SPATA31C2B4DYI2 1134 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 BTBD19C9JJ37 291 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 PDHXO00330 501 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 CCNE1P24864 410 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 SFNP31947 248 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 ALDH5A1P51649 535 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-207ENST00000612558 JAK3P52333 1124 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 ERVK-9P63128 1117 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 ERVK-24P63145 666 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 COASYQ13057 564 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 KCTD2Q14681 263 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 CDKAL1Q5VV42 579 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 CST9Q5W186 159 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 ZNF746Q6NUN9 644 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-207ENST00000612558 ANKRD23Q86SG2 305 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 GUF1Q8N442 669 aaKnown RBP9.9□□□□□ -0.82
CCDC47-207ENST00000612558 FAM133AQ8N9E0 248 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 KIAA0895Q8NCT3 520 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 SHCBP1Q8NEM2 672 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 RDM1Q8NG50 284 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 P2RX5Q93086 422 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 CTAGE1Q96RT6 745 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 MPHOSPH6Q99547 160 aaKnown RBP9.9□□□□□ -0.82
CCDC47-207ENST00000612558 SENP7Q9BQF6 1050 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 LXNQ9BS40 222 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 ZSWIM4Q9H7M6 989 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 SAMM50Q9Y512 469 aa9.9□□□□□ -0.82
CCDC47-207ENST00000612558 ASTN1O14525 1302 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 LCTP09848 1927 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 NPHP3-ACAD11A0A0J9YXS1 232 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms