RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 HOXA13P31271 388 aaPredicted RBP16.18■□□□□ 0.18
CDH1-213ENST00000612417 AP3B2Q13367 1082 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 HSP90B2PQ58FF3 399 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 HGSNATQ68CP4 663 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 MCTP2Q6DN12 878 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 ALS2CR12Q96Q35 445 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 AS3MTQ9HBK9 375 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 TCP1P17987 556 aaKnown RBP16.17■□□□□ 0.18
CDH1-213ENST00000612417 GYS2P54840 703 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 HNRNPH2P55795 449 aaKnown RBP16.17■□□□□ 0.18
CDH1-213ENST00000612417 CACNA2D4Q7Z3S7 1137 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 TRIM59Q8IWR1 403 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 RNF10Q8N5U6 811 aaKnown RBP16.17■□□□□ 0.18
CDH1-213ENST00000612417 CRYGNQ8WXF5 182 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 PITPNM2Q9BZ72 1349 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 TRAF5O00463 557 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 CFBP00751 764 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 FOSP01100 380 aaPredicted RBP16.17■□□□□ 0.18
CDH1-213ENST00000612417 PLA2G4BP0C869 781 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 PTPRAP18433 802 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 SLFN12Q8IYM2 578 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 CCDC155Q8N6L0 562 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 PRPF38AQ8NAV1 312 aaKnown RBP16.17■□□□□ 0.18
CDH1-213ENST00000612417 SMCR8Q8TEV9 937 aaPredicted RBP16.17■□□□□ 0.18
CDH1-213ENST00000612417 COG1Q8WTW3 980 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 KCTD10Q9H3F6 313 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 MLXIPQ9HAP2 919 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 MRPL11Q9Y3B7 192 aaKnown RBP16.17■□□□□ 0.18
CDH1-213ENST00000612417 ZHX2Q9Y6X8 837 aa16.17■□□□□ 0.18
CDH1-213ENST00000612417 FLOT1O75955 427 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 NOL4O94818 638 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 MOCS3O95396 460 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 CYP11B2P19099 503 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 MAGEA1P43355 309 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 EDRF1Q3B7T1 1238 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 CCDC40Q4G0X9 1142 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 CCDC70Q6NSX1 233 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 DLK2Q6UY11 383 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 CCNI2Q6ZMN8 369 aaPredicted RBP16.16■□□□□ 0.18
CDH1-213ENST00000612417 LDHDQ86WU2 507 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 ZNF280CQ8ND82 737 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 GJA10Q969M2 543 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 KLRG1Q96E93 195 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 OSBPL9Q96SU4 736 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 EMILIN3Q9NT22 766 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
CDH1-213ENST00000612417 FAM184BQ9ULE4 1060 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 HPCAL4Q9UM19 191 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 KIAA1024Q9UPX6 916 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 FAN1Q9Y2M0 1017 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 HYOU1Q9Y4L1 999 aa16.16■□□□□ 0.18
CDH1-213ENST00000612417 CTDP1Q9Y5B0 961 aaPredicted RBP16.16■□□□□ 0.18
CDH1-213ENST00000612417 ZC3H4Q9UPT8 1303 aaKnown RBP16.16■□□□□ 0.18
CDH1-213ENST00000612417 E9PMD0 336 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 OPLAHO14841 1288 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 SERPING1P05155 500 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 VCAM1P19320 739 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 BACE1P56817 501 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 ARHGAP4P98171 946 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 CCDC102AQ96A19 550 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 UIMC1Q96RL1 719 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 WDR18Q9BV38 432 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 RPAP3Q9H6T3 665 aaPredicted RBP16.15■□□□□ 0.18
CDH1-213ENST00000612417 CCPG1Q9ULG6 757 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 POTEB3A0JP26 581 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 POTECB2RU33 542 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 TBX3O15119 743 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 LMAN1P49257 510 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 SLC12A3P55017 1021 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 SLC9C1Q4G0N8 1177 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 HAUS3Q68CZ6 603 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 POTEBQ6S5H4 581 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 GPBP1Q86WP2 473 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 GOLGA5Q8TBA6 731 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 SCFD1Q8WVM8 642 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 AGBL1Q96MI9 1066 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
CDH1-213ENST00000612417 FGFBP2Q9BYJ0 223 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 BCCIPQ9P287 314 aaKnown RBP eCLIP16.15■□□□□ 0.18
CDH1-213ENST00000612417 TSKSQ9UJT2 592 aa16.15■□□□□ 0.18
CDH1-213ENST00000612417 ADM5C9JUS6 153 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 GCOM1H8Y6P7 765 aaPredicted RBP16.14■□□□□ 0.17
CDH1-213ENST00000612417 POLR2MP0CAP2 368 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 SPIRE1Q08AE8 756 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 C2orf54Q08AI8 447 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 SFMBT2Q5VUG0 894 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 CPXCR1Q8N123 301 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 SPATA4Q8NEY3 305 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 ETNPPLQ8TBG4 499 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 TBC1D5Q92609 795 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDH1-213ENST00000612417 PIK3CDO00329 1044 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 TLR2O60603 784 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 USP2O75604 605 aaPredicted RBP16.14■□□□□ 0.17
CDH1-213ENST00000612417 SYF2O95926 243 aaKnown RBP16.14■□□□□ 0.17
CDH1-213ENST00000612417 SSBP05455 408 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDH1-213ENST00000612417 ZNF76P36508 570 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 GFPT1Q06210 699 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms