RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 PTCH2Q9Y6C5 1203 aa21.82■■□□□ 1.08
SRRM3-205ENST00000612155 IPO5O00410 1097 aaKnown RBP21.82■■□□□ 1.08
SRRM3-205ENST00000612155 CHMP2AO43633 222 aa21.82■■□□□ 1.08
SRRM3-205ENST00000612155 ADCY3O60266 1144 aa21.82■■□□□ 1.08
SRRM3-205ENST00000612155 MYL1P05976 194 aa21.82■■□□□ 1.08
SRRM3-205ENST00000612155 HOXD10P28358 340 aa21.82■■□□□ 1.08
SRRM3-205ENST00000612155 ADKP55263 362 aaKnown RBP21.82■■□□□ 1.08
SRRM3-205ENST00000612155 KRT31Q15323 416 aa21.82■■□□□ 1.08
SRRM3-205ENST00000612155 TAPT1Q6NXT6 567 aa21.82■■□□□ 1.08
SRRM3-205ENST00000612155 XRRA1Q6P2D8 792 aa21.82■■□□□ 1.08
SRRM3-205ENST00000612155 GIMAP8Q8ND71 665 aaPredicted RBP21.82■■□□□ 1.08
SRRM3-205ENST00000612155 LRWD1Q9UFC0 647 aa21.82■■□□□ 1.08
SRRM3-205ENST00000612155 B4DLN1 442 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 ADCY6O43306 1168 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 ACVR2BQ13705 512 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 DHX8Q14562 1220 aaKnown RBP21.81■■□□□ 1.08
SRRM3-205ENST00000612155 ECM1Q16610 540 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 NLRX1Q86UT6 975 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 LIMA1Q9UHB6 759 aaKnown RBP21.81■■□□□ 1.08
SRRM3-205ENST00000612155 DNAH12Q6ZR08 3092 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 SYNGAP1Q96PV0 1343 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 XRCC5P13010 732 aaKnown RBP21.81■■□□□ 1.08
SRRM3-205ENST00000612155 GNPTABQ3T906 1256 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 KCNK18Q7Z418 384 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 GPRASP2Q96D09 838 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 NAP1L4Q99733 375 aaKnown RBP21.81■■□□□ 1.08
SRRM3-205ENST00000612155 MAGEF1Q9HAY2 307 aa21.81■■□□□ 1.08
SRRM3-205ENST00000612155 LRRC10BA6NIK2 292 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 SPATA31C2B4DYI2 1134 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 DYNC1I1O14576 645 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 MYCP01106 439 aaPredicted RBP21.8■■□□□ 1.08
SRRM3-205ENST00000612155 SETQ01105 290 aaPredicted RBP21.8■■□□□ 1.08
SRRM3-205ENST00000612155 CEP135Q66GS9 1140 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 OLFML2BQ68BL8 750 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 TRPV1Q8NER1 839 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 KCNA2P16389 499 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 PDIA5Q14554 519 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 PTPN14Q15678 1187 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 LRCH2Q5VUJ6 765 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 CYFIP1Q7L576 1253 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 HPS3Q969F9 1004 aa21.8■■□□□ 1.08
SRRM3-205ENST00000612155 DHX15O43143 795 aaKnown RBP21.79■■□□□ 1.08
SRRM3-205ENST00000612155 STAM2O75886 525 aa21.79■■□□□ 1.08
SRRM3-205ENST00000612155 IGHA2P01877 340 aa21.79■■□□□ 1.08
SRRM3-205ENST00000612155 TXNP10599 105 aaKnown RBP21.79■■□□□ 1.08
SRRM3-205ENST00000612155 UBA1P22314 1058 aaKnown RBP21.79■■□□□ 1.08
SRRM3-205ENST00000612155 CCT6AP40227 531 aaKnown RBP21.79■■□□□ 1.08
SRRM3-205ENST00000612155 STK4Q13043 487 aa21.79■■□□□ 1.08
SRRM3-205ENST00000612155 MCM6Q14566 821 aa21.79■■□□□ 1.08
SRRM3-205ENST00000612155 SH3TC2Q8TF17 1288 aa21.79■■□□□ 1.08
SRRM3-205ENST00000612155 SLC5A5Q92911 643 aa21.79■■□□□ 1.08
SRRM3-205ENST00000612155 ABHD16BQ9H3Z7 469 aa21.79■■□□□ 1.08
SRRM3-205ENST00000612155 PCDHA12Q9UN75 941 aa21.79■■□□□ 1.08
SRRM3-205ENST00000612155 MYMKA6NI61 221 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 GAS7O60861 476 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 ZNF865P0CJ78 1059 aaPredicted RBP21.78■■□□□ 1.08
SRRM3-205ENST00000612155 IRX5P78411 483 aaPredicted RBP21.78■■□□□ 1.08
SRRM3-205ENST00000612155 CACNB2Q08289 660 aaPredicted RBP21.78■■□□□ 1.08
SRRM3-205ENST00000612155 TCP11X2Q5H9J9 407 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 NIPA1Q7RTP0 329 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 CCDC112Q8NEF3 446 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 CALML4Q96GE6 196 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 PSMD10O75832 226 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 CNGA1P29973 690 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 VTA1Q9NP79 307 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 TAB2Q9NYJ8 693 aa21.78■■□□□ 1.08
SRRM3-205ENST00000612155 DDX41Q9UJV9 622 aaKnown RBP21.78■■□□□ 1.08
SRRM3-205ENST00000612155 KCNJ18B7U540 433 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 COPB1P53618 953 aaKnown RBP21.77■■□□□ 1.08
SRRM3-205ENST00000612155 ASIC1P78348 528 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 RBM10P98175 930 aaKnown RBP21.77■■□□□ 1.08
SRRM3-205ENST00000612155 IRF5Q13568 498 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 KCNJ12Q14500 433 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 TMEM119Q4V9L6 283 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 NCAPH2Q6IBW4 605 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 TTI2Q6NXR4 508 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 CCDC62Q6P9F0 684 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 DUSP9Q99956 384 aaKnown RBP21.77■■□□□ 1.08
SRRM3-205ENST00000612155 UNC45AQ9H3U1 944 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 VAV3Q9UKW4 847 aa21.77■■□□□ 1.08
SRRM3-205ENST00000612155 EML1O00423 815 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 GGPS1O95749 300 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 GNRH1P01148 92 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 PRKAR2AP13861 404 aaKnown RBP21.77■■□□□ 1.07
SRRM3-205ENST00000612155 SMPD1P17405 629 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 CCND3P30281 292 aaPredicted RBP21.77■■□□□ 1.07
SRRM3-205ENST00000612155 ICAM3P32942 547 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 RBL2Q08999 1139 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 SPIRE1Q08AE8 756 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 TMEM266Q2M3C6 531 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 MFSD14CQ5VZR4 134 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 ZNF592Q92610 1267 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 CTAGE1Q96RT6 745 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 VPS16Q9H269 839 aa21.77■■□□□ 1.07
SRRM3-205ENST00000612155 LOC102724159A0A0B4J2E5 919 aa21.76■■□□□ 1.07
SRRM3-205ENST00000612155 CCNE2O96020 404 aa21.76■■□□□ 1.07
SRRM3-205ENST00000612155 CTCFP49711 727 aaPredicted RBP21.76■■□□□ 1.07
SRRM3-205ENST00000612155 ARHGEF6Q15052 776 aa21.76■■□□□ 1.07
SRRM3-205ENST00000612155 PWP2Q15269 919 aaKnown RBP21.76■■□□□ 1.07
SRRM3-205ENST00000612155 REXO1L1PQ8IX06 675 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms