RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 RRAGAQ7L523 313 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 TBC1D1Q86TI0 1168 aaPredicted RBP13.03□□□□□ -0.32
TP53-220ENST00000610623 MIGA1Q8NAN2 632 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 UBLCP1Q8WVY7 318 aaPredicted RBP13.03□□□□□ -0.32
TP53-220ENST00000610623 BRIP1Q9BX63 1249 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 NUCKS1Q9H1E3 243 aaKnown RBP13.03□□□□□ -0.32
TP53-220ENST00000610623 MAGEF1Q9HAY2 307 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 FBXL5Q9UKA1 691 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 BACH1O14867 736 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.32
TP53-220ENST00000610623 GFPT1Q06210 699 aaPredicted RBP13.02□□□□□ -0.32
TP53-220ENST00000610623 SEC23AQ15436 765 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 IFI16Q16666 785 aaKnown RBP13.02□□□□□ -0.32
TP53-220ENST00000610623 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 SMIM5Q71RC9 77 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 TRPM8Q7Z2W7 1104 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 KLHL7Q8IXQ5 586 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 PARD3BQ8TEW8 1205 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 SCFD2Q8WU76 684 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 BAP1Q92560 729 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 RIOK1Q9BRS2 568 aaKnown RBP13.02□□□□□ -0.32
TP53-220ENST00000610623 CUEDC2Q9H467 287 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 FAM207AQ9NSI2 230 aaPredicted RBP13.02□□□□□ -0.32
TP53-220ENST00000610623 PANK4Q9NVE7 773 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 SAMD15Q9P1V8 674 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.32
TP53-220ENST00000610623 A6NHS1 94 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 DIAPH2O60879 1101 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 KIAA0753Q2KHM9 967 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 KRT71Q3SY84 523 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 PIK3AP1Q6ZUJ8 805 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 SEPT12Q8IYM1 358 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 STAG2Q8N3U4 1231 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 TEX9Q8N6V9 391 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 C4orf32Q8N8J7 132 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 CERKQ8TCT0 537 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 TAF4BQ92750 862 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 SYN2Q92777 582 aaPredicted RBP13.02□□□□□ -0.33
TP53-220ENST00000610623 ZBTB10Q96DT7 871 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 PBKQ96KB5 322 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 MMRN2Q9H8L6 949 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 DUOX1Q9NRD9 1551 aa13.02□□□□□ -0.33
TP53-220ENST00000610623 ENO4A6NNW6 628 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 EPHB6O15197 1021 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 SART1O43290 800 aaKnown RBP13.01□□□□□ -0.33
TP53-220ENST00000610623 CALM1P0DP23 149 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 CALM2P0DP24 149 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 CALM3P0DP25 149 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 NQO1P15559 274 aaKnown RBP13.01□□□□□ -0.33
TP53-220ENST00000610623 TM4SF1P30408 202 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 SLC9C1Q4G0N8 1177 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 APLFQ8IW19 511 aaPredicted RBP13.01□□□□□ -0.33
TP53-220ENST00000610623 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 ACTRT1Q8TDG2 376 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 CCSER1Q9C0I3 900 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 BMP2KQ9NSY1 1161 aaPredicted RBP13.01□□□□□ -0.33
TP53-220ENST00000610623 FTCDO95954 541 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 NEFHP12036 1026 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 ZNF131P52739 623 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 EHHADHQ08426 723 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 PDCD2Q16342 344 aaPredicted RBP13.01□□□□□ -0.33
TP53-220ENST00000610623 MAN2A1Q16706 1144 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 FAM182BQ5T319 152 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 HGSNATQ68CP4 663 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 SPTY2D1Q68D10 685 aaPredicted RBP13.01□□□□□ -0.33
TP53-220ENST00000610623 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 TMC3Q7Z5M5 1100 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 ADGRA1Q86SQ6 560 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 HOOK3Q86VS8 718 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 GLMNQ92990 594 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 TNKSO95271 1327 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 MYH7BA7E2Y1 1941 aa13.01□□□□□ -0.33
TP53-220ENST00000610623 DCDC2CA8MYV0 355 aa13□□□□□ -0.33
TP53-220ENST00000610623 CCDC188H7C350 402 aa13□□□□□ -0.33
TP53-220ENST00000610623 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
TP53-220ENST00000610623 GRAPQ13588 217 aa13□□□□□ -0.33
TP53-220ENST00000610623 DTHD1Q6ZMT9 781 aa13□□□□□ -0.33
TP53-220ENST00000610623 CATIPQ7Z7H3 387 aa13□□□□□ -0.33
TP53-220ENST00000610623 GBP7Q8N8V2 638 aaPredicted RBP13□□□□□ -0.33
TP53-220ENST00000610623 CNBD1Q8NA66 436 aa13□□□□□ -0.33
TP53-220ENST00000610623 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
TP53-220ENST00000610623 ESR2Q92731 530 aa13□□□□□ -0.33
TP53-220ENST00000610623 ITFG2Q969R8 447 aa13□□□□□ -0.33
TP53-220ENST00000610623 NSRP1Q9H0G5 558 aaKnown RBP13□□□□□ -0.33
TP53-220ENST00000610623 CCDC134Q9H6E4 229 aa13□□□□□ -0.33
TP53-220ENST00000610623 POM121CA8CG34 1229 aa13□□□□□ -0.33
TP53-220ENST00000610623 F8VZ95 297 aa13□□□□□ -0.33
TP53-220ENST00000610623 STXBP3O00186 592 aa13□□□□□ -0.33
TP53-220ENST00000610623 SERPING1P05155 500 aa13□□□□□ -0.33
TP53-220ENST00000610623 FERP16591 822 aa13□□□□□ -0.33
TP53-220ENST00000610623 UBA7P41226 1012 aa13□□□□□ -0.33
TP53-220ENST00000610623 RAB27AP51159 221 aa13□□□□□ -0.33
TP53-220ENST00000610623 RPS6KA3P51812 740 aa13□□□□□ -0.33
TP53-220ENST00000610623 NFIXQ14938 502 aa13□□□□□ -0.33
TP53-220ENST00000610623 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
TP53-220ENST00000610623 SLC30A9Q6PML9 568 aa13□□□□□ -0.33
TP53-220ENST00000610623 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
TP53-220ENST00000610623 MFN1Q8IWA4 741 aa13□□□□□ -0.33
TP53-220ENST00000610623 SEC14L1Q92503 715 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms