RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 NRBP2Q9NSY0 501 aa16.09■□□□□ 0.17
HDDC2-209ENST00000609477 GABBR1Q9UBS5 961 aa16.09■□□□□ 0.17
HDDC2-209ENST00000609477 NOL7Q9UMY1 257 aaKnown RBP16.09■□□□□ 0.17
HDDC2-209ENST00000609477 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
HDDC2-209ENST00000609477 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
HDDC2-209ENST00000609477 FAM205CA6NFA0 338 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 RSPH10B2B2RC85 870 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 NEMFO60524 1076 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 BAIAP3O94812 1187 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 CXCL10P02778 98 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 RSPH10BP0C881 870 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 PDCP20941 246 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 CALCRLQ16602 461 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 FAM26DQ5JW98 314 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 ZNF618Q5T7W0 954 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 CKAP2LQ8IYA6 745 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 UIMC1Q96RL1 719 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 VAV3Q9UKW4 847 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 PCDHA12Q9UN75 941 aa16.08■□□□□ 0.16
HDDC2-209ENST00000609477 SMIM35A0A1B0GVV1 85 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 H3BQV1 296 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 CHMP2AO43633 222 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 EFCAB14O75071 495 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 ATP4AP20648 1035 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 SMAD3P84022 425 aaKnown RBP16.07■□□□□ 0.16
HDDC2-209ENST00000609477 TRAF7Q6Q0C0 670 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 MTMR9Q96QG7 549 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 PCDH10Q9P2E7 1040 aa16.07■□□□□ 0.16
HDDC2-209ENST00000609477 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.06■□□□□ 0.16
HDDC2-209ENST00000609477 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.06■□□□□ 0.16
HDDC2-209ENST00000609477 K7ELQ4 463 aaPredicted RBP16.06■□□□□ 0.16
HDDC2-209ENST00000609477 MAGEB2O15479 319 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 OATP04181 439 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 P4HBP07237 508 aaKnown RBP16.06■□□□□ 0.16
HDDC2-209ENST00000609477 ACRP10323 421 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 PSMC5P62195 406 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 EPHA7Q15375 998 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 XKR3Q5GH77 459 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 IER5Q5VY09 327 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 LARP1BQ659C4 914 aaKnown RBP16.06■□□□□ 0.16
HDDC2-209ENST00000609477 MTHFD1LQ6UB35 978 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 WNT8BQ93098 351 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 GJA10Q969M2 543 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 VWCEQ96DN2 955 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 FTOQ9C0B1 505 aaKnown RBP eCLIP16.06■□□□□ 0.163e-7■■■□□ 17.7
HDDC2-209ENST00000609477 PPME1Q9Y570 386 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 SQORQ9Y6N5 450 aa16.06■□□□□ 0.16
HDDC2-209ENST00000609477 KLRC1P26715 233 aa16.05■□□□□ 0.16
HDDC2-209ENST00000609477 QARSP47897 775 aaKnown RBP16.05■□□□□ 0.16
HDDC2-209ENST00000609477 IGBP1P78318 339 aa16.05■□□□□ 0.16
HDDC2-209ENST00000609477 SPIRE1Q08AE8 756 aa16.05■□□□□ 0.16
HDDC2-209ENST00000609477 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
HDDC2-209ENST00000609477 CNKSR3Q6P9H4 555 aa16.05■□□□□ 0.16
HDDC2-209ENST00000609477 DEFB128Q7Z7B8 93 aa16.05■□□□□ 0.16
HDDC2-209ENST00000609477 USP38Q8NB14 1042 aa16.05■□□□□ 0.16
HDDC2-209ENST00000609477 NEK9Q8TD19 979 aa16.05■□□□□ 0.16
HDDC2-209ENST00000609477 NIFKQ9BYG3 293 aaKnown RBP16.05■□□□□ 0.16
HDDC2-209ENST00000609477 TTC12Q9H892 705 aaPredicted RBP16.05■□□□□ 0.16
HDDC2-209ENST00000609477 SCN5AQ14524 2016 aa16.05■□□□□ 0.16
HDDC2-209ENST00000609477 KDM3AQ9Y4C1 1321 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 ABHD14A-ACY1A0A1B0GW23 586 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 ZBTB42B2RXF5 422 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 M0QZ92 97 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 LAD1O00515 517 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 ZNF862O60290 1169 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 NBNO60934 754 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
HDDC2-209ENST00000609477 MCM7P33993 719 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 PRKCEQ02156 737 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 GPNMBQ14956 572 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 TTC38Q5R3I4 469 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 OTOP2Q7RTS6 562 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 EXOC8Q8IYI6 725 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 PHOSPHO2Q8TCD6 241 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 APBB2Q92870 758 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 SLC4A7Q9Y6M7 1214 aa16.04■□□□□ 0.16
HDDC2-209ENST00000609477 KIF28PB7ZC32 967 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 EML1O00423 815 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 TMOD1P28289 359 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 CDC42EP1Q00587 391 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 IKBKEQ14164 716 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 PLEKHG4Q58EX7 1191 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 FAM109BQ6ICB4 259 aaPredicted RBP16.03■□□□□ 0.16
HDDC2-209ENST00000609477 RUFY4Q6ZNE9 571 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 C4orf19Q8IY42 314 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 DNAJB3Q8WWF6 145 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 JPH2Q9BR39 696 aaPredicted RBP16.03■□□□□ 0.16
HDDC2-209ENST00000609477 ZSWIM4Q9H7M6 989 aa16.03■□□□□ 0.16
HDDC2-209ENST00000609477 LAMA2P24043 3122 aaKnown RBP16.03■□□□□ 0.16
HDDC2-209ENST00000609477 TMEM265A0A087WTH1 108 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 WNT7AO00755 349 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 C22orf31O95567 290 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 CHRNA1P02708 482 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 OR52Z1P0C646 297 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 ATP2B1P20020 1258 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 TXKP42681 527 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 MRPS6P82932 125 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms