RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 GJB4Q9NTQ9 266 aa21.71■■□□□ 1.07
SRSF4-206ENST00000605204 SLC4A7Q9Y6M7 1214 aa21.71■■□□□ 1.07
SRSF4-206ENST00000605204 INSRRP14616 1297 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 PLCB4Q15147 1175 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 CNKSR3Q6P9H4 555 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 TRAF7Q6Q0C0 670 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 DIS3L2Q8IYB7 885 aaKnown RBP21.7■■□□□ 1.06
SRSF4-206ENST00000605204 ETNPPLQ8TBG4 499 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 OXER1Q8TDS5 423 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 TNFRSF25Q93038 417 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 WNT8BQ93098 351 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 VWCEQ96DN2 955 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 C8orf76Q96K31 380 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 CEP131Q9UPN4 1083 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 SAMM50Q9Y512 469 aa21.7■■□□□ 1.06
SRSF4-206ENST00000605204 MAFBQ9Y5Q3 323 aaPredicted RBP21.7■■□□□ 1.06
SRSF4-206ENST00000605204 IGSF9BQ9UPX0 1349 aa21.69■■□□□ 1.06
SRSF4-206ENST00000605204 PSMD10O75832 226 aa21.69■■□□□ 1.06
SRSF4-206ENST00000605204 SWSAP1Q6NVH7 229 aa21.69■■□□□ 1.06
SRSF4-206ENST00000605204 PHOSPHO2Q8TCD6 241 aa21.69■■□□□ 1.06
SRSF4-206ENST00000605204 BBXQ8WY36 941 aaPredicted RBP21.69■■□□□ 1.06
SRSF4-206ENST00000605204 TIFAQ96CG3 184 aa21.69■■□□□ 1.06
SRSF4-206ENST00000605204 SLC9A7Q96T83 725 aa21.69■■□□□ 1.06
SRSF4-206ENST00000605204 DISC1Q9NRI5 854 aa21.69■■□□□ 1.06
SRSF4-206ENST00000605204 DOCK5Q9H7D0 1870 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 ABHD14A-ACY1A0A1B0GW23 586 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 ZBBXA8MT70 800 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 CCNT1O60563 726 aaKnown RBP21.68■■□□□ 1.06
SRSF4-206ENST00000605204 NR5A1Q13285 461 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 RAB30Q15771 203 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 ZNF484Q5JVG2 852 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 FAM26DQ5JW98 314 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 CKAP2LQ8IYA6 745 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 SLFN12Q8IYM2 578 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 PBX4Q9BYU1 374 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 KCNMB3Q9NPA1 279 aa21.68■■□□□ 1.06
SRSF4-206ENST00000605204 NBNO60934 754 aa21.67■■□□□ 1.06
SRSF4-206ENST00000605204 MARCH8Q5T0T0 291 aa21.67■■□□□ 1.06
SRSF4-206ENST00000605204 FAM43BQ6ZT52 329 aaPredicted RBP21.67■■□□□ 1.06
SRSF4-206ENST00000605204 BACH2Q9BYV9 841 aa21.67■■□□□ 1.06
SRSF4-206ENST00000605204 ZNF576Q9H609 170 aa21.67■■□□□ 1.06
SRSF4-206ENST00000605204 CXXC1Q9P0U4 656 aaPredicted RBP21.67■■□□□ 1.06
SRSF4-206ENST00000605204 PCDHA2Q9Y5H9 948 aa21.67■■□□□ 1.06
SRSF4-206ENST00000605204 BTBD18B2RXH4 712 aa21.66■■□□□ 1.06
SRSF4-206ENST00000605204 ATP2A2P16615 1042 aaKnown RBP21.66■■□□□ 1.06
SRSF4-206ENST00000605204 B3GNT9Q6UX72 402 aa21.66■■□□□ 1.06
SRSF4-206ENST00000605204 FBXO18Q8NFZ0 1043 aa21.66■■□□□ 1.06
SRSF4-206ENST00000605204 FOXP1Q9H334 677 aaPredicted RBP21.66■■□□□ 1.06
SRSF4-206ENST00000605204 PRDM6Q9NQX0 595 aa21.66■■□□□ 1.06
SRSF4-206ENST00000605204 GABBR1Q9UBS5 961 aa21.66■■□□□ 1.06
SRSF4-206ENST00000605204 GTF3C3Q9Y5Q9 886 aa21.66■■□□□ 1.06
SRSF4-206ENST00000605204 SMIM35A0A1B0GVV1 85 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 M0QZ92 97 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 SLC37A4O43826 429 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 BAG4O95429 457 aaKnown RBP21.65■■□□□ 1.06
SRSF4-206ENST00000605204 KCNJ6P48051 423 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 IGBP1P78318 339 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 PPP2R5CQ13362 524 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 ORC2Q13416 577 aaPredicted RBP21.65■■□□□ 1.06
SRSF4-206ENST00000605204 IKBKEQ14164 716 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 GPNMBQ14956 572 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 IER5Q5VY09 327 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 MIER3Q7Z3K6 550 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 NME8Q8N427 588 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 APBB2Q92870 758 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 UNC45AQ9H3U1 944 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 MSRAQ9UJ68 235 aa21.65■■□□□ 1.06
SRSF4-206ENST00000605204 CHMP2AO43633 222 aa21.64■■□□□ 1.06
SRSF4-206ENST00000605204 MARCH6O60337 910 aa21.64■■□□□ 1.06
SRSF4-206ENST00000605204 DKC1O60832 514 aaKnown RBP eCLIP21.64■■□□□ 1.06
SRSF4-206ENST00000605204 MBTPS1Q14703 1052 aa21.64■■□□□ 1.06
SRSF4-206ENST00000605204 ZNF710Q8N1W2 664 aa21.64■■□□□ 1.06
SRSF4-206ENST00000605204 SEPT8Q92599 483 aa21.64■■□□□ 1.06
SRSF4-206ENST00000605204 TMX3Q96JJ7 454 aa21.64■■□□□ 1.06
SRSF4-206ENST00000605204 UIMC1Q96RL1 719 aa21.64■■□□□ 1.06
SRSF4-206ENST00000605204 NRBP2Q9NSY0 501 aa21.64■■□□□ 1.06
SRSF4-206ENST00000605204 SQORQ9Y6N5 450 aa21.64■■□□□ 1.06
SRSF4-206ENST00000605204 MYO9BQ13459 2157 aa21.64■■□□□ 1.05
SRSF4-206ENST00000605204 SCN5AQ14524 2016 aa21.64■■□□□ 1.05
SRSF4-206ENST00000605204 MAGEB2O15479 319 aa21.63■■□□□ 1.05
SRSF4-206ENST00000605204 DTNBO60941 627 aa21.63■■□□□ 1.05
SRSF4-206ENST00000605204 OATP04181 439 aa21.63■■□□□ 1.05
SRSF4-206ENST00000605204 CTSHP09668 335 aa21.63■■□□□ 1.05
SRSF4-206ENST00000605204 PLEKHG4Q58EX7 1191 aa21.63■■□□□ 1.05
SRSF4-206ENST00000605204 EARS2Q5JPH6 523 aaKnown RBP21.63■■□□□ 1.05
SRSF4-206ENST00000605204 MTHFD1LQ6UB35 978 aa21.63■■□□□ 1.05
SRSF4-206ENST00000605204 RUFY4Q6ZNE9 571 aa21.63■■□□□ 1.05
SRSF4-206ENST00000605204 PCDHA11Q9Y5I1 949 aa21.63■■□□□ 1.05
SRSF4-206ENST00000605204 XIRP2A4UGR9 3374 aa21.63■■□□□ 1.05
SRSF4-206ENST00000605204 NEMFO60524 1076 aa21.62■■□□□ 1.05
SRSF4-206ENST00000605204 MRPS6P82932 125 aaKnown RBP21.62■■□□□ 1.05
SRSF4-206ENST00000605204 GNL2Q13823 731 aaKnown RBP21.62■■□□□ 1.05
SRSF4-206ENST00000605204 DNAJB3Q8WWF6 145 aa21.62■■□□□ 1.05
SRSF4-206ENST00000605204 VAV3Q9UKW4 847 aa21.62■■□□□ 1.05
SRSF4-206ENST00000605204 KIF28PB7ZC32 967 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 ATP4AP20648 1035 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 KLRC1P26715 233 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 TRAPPC10P48553 1259 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 FOSBP53539 338 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 WDR5P61964 334 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms