RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 OSBPL1AQ9BXW6 950 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 PCDH11XQ9BZA7 1347 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 PCDH11YQ9BZA8 1340 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 ERVV-2B6SEH9 535 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 FGGP02679 453 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 ZBTB48P10074 688 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 ACTN1P12814 892 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 GRB10Q13322 594 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 PRPF4BQ13523 1007 aaKnown RBP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 ZNF571Q7Z3V5 609 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 NEK9Q8TD19 979 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 CNKSR1Q969H4 720 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 NSRP1Q9H0G5 558 aaKnown RBP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 HOMER3Q9NSC5 361 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 TBC1D7Q9P0N9 293 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 PNMA3Q9UL41 463 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 SNX3O60493 162 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 PMS2P54278 862 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 PLTPP55058 493 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 TAF11Q15544 211 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 TPCN2Q8NHX9 752 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 EPS8L3Q8TE67 593 aaKnown RBP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 RNF25Q96BH1 459 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 CDK5RAP3Q96JB5 506 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 KIF13AQ9H1H9 1805 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 IRF6O14896 467 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 EPS15P42566 896 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 MSH2P43246 934 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 SLC29A2Q14542 456 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 SLC35G1Q2M3R5 365 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 SEC14L1Q92503 715 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 GLG1Q92896 1179 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 TXLNGYQ9BZA5 131 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 CPVLQ9H3G5 476 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 ADAM22Q9P0K1 906 aa13.53□□□□□ -0.24
CDCA3-212ENST00000604599 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDCA3-212ENST00000604599 CCDC169A6NNP5 214 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 RWDD2BP57060 319 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 FKBP3Q00688 224 aaKnown RBP13.52□□□□□ -0.24
CDCA3-212ENST00000604599 IFI16Q16666 785 aaKnown RBP13.52□□□□□ -0.24
CDCA3-212ENST00000604599 NBPF20Q3BBV1 942 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 GNPTABQ3T906 1256 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 ALKBH5Q6P6C2 394 aaKnown RBP13.52□□□□□ -0.24
CDCA3-212ENST00000604599 DYDC1Q8WWB3 177 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 DDX12PQ92771 950 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 PGM2Q96G03 612 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 BRIP1Q9BX63 1249 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 PABPC3Q9H361 631 aaKnown RBP13.52□□□□□ -0.24
CDCA3-212ENST00000604599 AIPL1Q9NZN9 384 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 ZFATQ9P243 1243 aa13.52□□□□□ -0.24
CDCA3-212ENST00000604599 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.25
CDCA3-212ENST00000604599 STXBP3O00186 592 aa13.52□□□□□ -0.25
CDCA3-212ENST00000604599 FGRP09769 529 aa13.52□□□□□ -0.25
CDCA3-212ENST00000604599 COPS2P61201 443 aa13.52□□□□□ -0.25
CDCA3-212ENST00000604599 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
CDCA3-212ENST00000604599 CPSF2Q9P2I0 782 aaKnown RBP13.52□□□□□ -0.25
CDCA3-212ENST00000604599 NAGPAQ9UK23 515 aa13.52□□□□□ -0.25
CDCA3-212ENST00000604599 USP15Q9Y4E8 981 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-212ENST00000604599 ANKRD33BA6NCL7 494 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 MPHOSPH10O00566 681 aaKnown RBP13.51□□□□□ -0.25
CDCA3-212ENST00000604599 CYTH3O43739 400 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 NUDT17P0C025 328 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 PECAM1P16284 738 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-212ENST00000604599 GYG1P46976 350 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 CTCFP49711 727 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-212ENST00000604599 PDE6CP51160 858 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 LACTBP83111 547 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-212ENST00000604599 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 MYOCDQ8IZQ8 938 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 FBXO25Q8TCJ0 367 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 PNMA5Q96PV4 448 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 RAB17Q9H0T7 212 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 MLXIPLQ9NP71 852 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 SNX24Q9Y343 169 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 POTEMA6NI47 508 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-212ENST00000604599 ATP11AP98196 1134 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 DR1Q01658 176 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 POU5F1Q01860 360 aaKnown RBP13.51□□□□□ -0.25
CDCA3-212ENST00000604599 RASGEF1CQ8N431 466 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 GANQ9H2C0 597 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 ZDHHC18Q9NUE0 388 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
CDCA3-212ENST00000604599 GOLGA6L10A0A0M3HER8 536 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 BTNL10A8MVZ5 291 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 TCP11X1B4DZS4 312 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 LUC7L3O95232 432 aaKnown RBP13.5□□□□□ -0.25
CDCA3-212ENST00000604599 GOLGA8HP0CJ92 632 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 ATP4AP20648 1035 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 ZNF131P52739 623 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 BNIP1Q12981 228 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 NONOQ15233 471 aaKnown RBP eCLIP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms