RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 SAMD15Q9P1V8 674 aa7.06□□□□□ -1.28
SRGAP2-211ENST00000604423 SLC12A6Q9UHW9 1150 aa7.06□□□□□ -1.28
SRGAP2-211ENST00000604423 CAMTA1Q9Y6Y1 1673 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 CCT8L1PA6NM43 557 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ZNF263O14978 683 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ANP32DO95626 131 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 MYL1P05976 194 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PLEKP08567 350 aaPredicted RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 SOX11P35716 441 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 EIF4A3P38919 411 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PPP1R2P41236 205 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 UBE3CQ15386 1083 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 KRT71Q3SY84 523 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 CCDC178Q5BJE1 867 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PI16Q6UXB8 463 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 RIPOR1Q6ZS17 1223 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 IRF2BP1Q8IU81 584 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 KLHL7Q8IXQ5 586 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 DEPDC4Q8N2C3 294 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 RNF10Q8N5U6 811 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 FANCBQ8NB91 859 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ADAMTS19Q8TE59 1207 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 CCT6BQ92526 530 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 CHMP6Q96FZ7 201 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 DHTKD1Q96HY7 919 aaPredicted RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ZNF496Q96IT1 587 aaPredicted RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PSMD1Q99460 953 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 GAS2L1Q99501 681 aaPredicted RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PUS3Q9BZE2 481 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 NACAP1Q9BZK3 213 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 SLC39A2Q9NP94 309 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 NOVA2Q9UNW9 492 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 MYH1P12882 1939 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ENO4A6NNW6 628 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 MPHOSPH10O00566 681 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 LIN7AO14910 233 aaPredicted RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 RAD51CO43502 376 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 CTNND1O60716 968 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 MCM7P33993 719 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 LONP1P36776 959 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PHKA2P46019 1235 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PMS1P54277 932 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 MAGOHP61326 146 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 RASSF7Q02833 373 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ZNF844Q08AG5 666 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 RIPK1Q13546 671 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ITIH4Q14624 930 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 KCNB1Q14721 858 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PPP2R5BQ15173 497 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 KLHDC7AQ5VTJ3 777 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 CDCA2Q69YH5 1023 aaPredicted RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 HOOK3Q86VS8 718 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ANKRD13CQ8N6S4 541 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 EIF1ADQ8N9N8 165 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 OR2W6PQ8NHA6 318 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PARD3BQ8TEW8 1205 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 MAGOHBQ96A72 148 aaKnown RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ZBTB10Q96DT7 871 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 CNTNAP3BQ96NU0 1288 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ERGIC2Q96RQ1 377 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PHF20Q9BVI0 1012 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 TLR10Q9BXR5 811 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 CNTNAP3Q9BZ76 1288 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ISCUQ9H1K1 167 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 RNF41Q9H4P4 317 aaPredicted RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ETNK1Q9HBU6 452 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 DISC1Q9NRI5 854 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 BSDC1Q9NW68 430 aaPredicted RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 CUEDC1Q9NWM3 386 aaPredicted RBP7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 ARHGAP20Q9P2F6 1191 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 PLAGL2Q9UPG8 496 aa7.05□□□□□ -1.28
SRGAP2-211ENST00000604423 MYH7BA7E2Y1 1941 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 AKAP11Q9UKA4 1901 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 EME2A4GXA9 379 aaPredicted RBP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 PHF20L1A8MW92 1017 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 BACH1O14867 736 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 PJA2O43164 708 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 PRDM1O75626 825 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 PALMO75781 387 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 SMNDC1O75940 238 aaKnown RBP eCLIP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 LCA5LO95447 670 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 PECAM1P16284 738 aaPredicted RBP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 PDE6AP16499 860 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 KIF5BP33176 963 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 GPC1P35052 558 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 MCAMP43121 646 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 TRAPPC10P48553 1259 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 LACTBP83111 547 aaPredicted RBP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 CENPCQ03188 943 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 TRAF1Q13077 416 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 SEPT2Q15019 361 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 PDCD2Q16342 344 aaPredicted RBP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 IFI16Q16666 785 aaKnown RBP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 METTL24Q5JXM2 366 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 TTI2Q6NXR4 508 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 RRAGAQ7L523 313 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 TBC1D1Q86TI0 1168 aaPredicted RBP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 IFNL3Q8IZI9 196 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 CCDC26Q8TAB7 109 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 RAPGEF4Q8WZA2 1011 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms