RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CTC1Q2NKJ3 1217 aa20.32■□□□□ 0.84
SHKBP1-227ENST00000602011 NPAS4Q8IUM7 802 aa20.32■□□□□ 0.84
SHKBP1-227ENST00000602011 PCYT2Q99447 389 aa20.32■□□□□ 0.84
SHKBP1-227ENST00000602011 CELF4Q9BZC1 486 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-227ENST00000602011 CLDND1Q9NY35 253 aa20.32■□□□□ 0.84
SHKBP1-227ENST00000602011 BARHL2Q9NY43 387 aa20.32■□□□□ 0.84
SHKBP1-227ENST00000602011 V9GY48 417 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-227ENST00000602011 PIEZO1Q92508 2521 aa20.32■□□□□ 0.84
SHKBP1-227ENST00000602011 ATG2AQ2TAZ0 1938 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 hCG_1642624A0A1W2PR95 340 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 POTEB3A0JP26 581 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 SMCO2A6NFE2 343 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 HBP1O60381 514 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 ZNF76P36508 570 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 SREBF1P36956 1147 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 PLCB4Q15147 1175 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 FAM160B1Q5W0V3 765 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 WWC2Q6AWC2 1192 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 POTEBQ6S5H4 581 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 AGO4Q9HCK5 861 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 PKD2L1Q9P0L9 805 aa20.31■□□□□ 0.84
SHKBP1-227ENST00000602011 IGSF9BQ9UPX0 1349 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 IGKV6D-21A0A0A0MT36 114 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 LINC00271P0C7V0 271 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 PAK2Q13177 524 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 CRIPAKQ8N1N5 446 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 ZNF710Q8N1W2 664 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 POP1Q99575 1024 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 LRRC2Q9BYS8 371 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 ANO3Q9BYT9 981 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 FAM49AQ9H0Q0 323 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 AGO3Q9H9G7 860 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 PADI3Q9ULW8 664 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 C5orf42Q9H799 3197 aa20.3■□□□□ 0.84
SHKBP1-227ENST00000602011 CNTNAP5Q8WYK1 1306 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 TTC3P53804 2025 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 GRM6O15303 877 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 MMP1P03956 469 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 CD52P31358 61 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 LTBRP36941 435 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 KRT76Q01546 638 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 ZP2Q05996 745 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 DLX2Q07687 328 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 FUT2Q10981 343 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 ZNF484Q5JVG2 852 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 MTHFD1LQ6UB35 978 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 ADHFE1Q8IWW8 467 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 CYP2W1Q8TAV3 490 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 CCDC12Q8WUD4 166 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 PLAGL2Q9UPG8 496 aa20.29■□□□□ 0.84
SHKBP1-227ENST00000602011 DCXO43602 365 aa20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 CYP3A4P08684 503 aa20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 ARP10275 920 aa20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 GTF2F1P35269 517 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■■■■■ 54.6
SHKBP1-227ENST00000602011 CLK2P49760 499 aaKnown RBP20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 CSPP1Q1MSJ5 1256 aa20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 ABHD15Q6UXT9 468 aa20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 RTN4RL1Q86UN2 441 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 RAB11FIP4Q86YS3 637 aa20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 ATP8B4Q8TF62 1192 aa20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 TBC1D22BQ9NU19 505 aa20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 COL1A2P08123 1366 aa20.28■□□□□ 0.84
SHKBP1-227ENST00000602011 FSD2A1L4K1 749 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 C19orf67A6NJJ6 358 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 STXBP3O00186 592 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 SCG2P13521 617 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 KLRC1P26715 233 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 HYAL1Q12794 435 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 ITGB3BPQ13352 177 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 MIS18BP1Q6P0N0 1132 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 ZBTB10Q96DT7 871 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 AAASQ9NRG9 546 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 C1orf112Q9NSG2 853 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 LRFN2Q9ULH4 789 aa20.27■□□□□ 0.84
SHKBP1-227ENST00000602011 ESYT2A0FGR8 921 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 GOLGA8AA7E2F4 631 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 GOLGA8BA8MQT2 603 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 BACH1O14867 736 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 GPR182O15218 404 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 GNA11P29992 359 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 SARSP49591 514 aaKnown RBP20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 FGD1P98174 961 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 SETQ01105 290 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 UBE3AQ05086 875 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 SMAD2Q15796 467 aaKnown RBP20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 TYW1BQ6NUM6 668 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 KCNH6Q9H252 994 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 IGFLR1Q9H665 355 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 C6orf50Q9HD87 102 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 TCEAL9Q9UHQ7 104 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 BRPF3Q9ULD4 1205 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 PCDHB7Q9Y5E2 793 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 RALGAPA2Q2PPJ7 1873 aa20.26■□□□□ 0.83
SHKBP1-227ENST00000602011 WDFY4Q6ZS81 3184 aa20.25■□□□□ 0.83
SHKBP1-227ENST00000602011 LINC01565O15544 149 aa20.25■□□□□ 0.83
SHKBP1-227ENST00000602011 IRS1P35568 1242 aa20.25■□□□□ 0.83
SHKBP1-227ENST00000602011 ADAM15Q13444 863 aa20.25■□□□□ 0.83
SHKBP1-227ENST00000602011 COL9A3Q14050 684 aaPredicted RBP20.25■□□□□ 0.83
SHKBP1-227ENST00000602011 PFKFB3Q16875 520 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms