RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ECM2O94769 699 aaPredicted RBP19.99■□□□□ 0.79
VRK3-225ENST00000601912 ARIH2O95376 493 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 EHHADHQ08426 723 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 COBLL1Q53SF7 1204 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 HERC4Q5GLZ8 1057 aaPredicted RBP19.99■□□□□ 0.79
VRK3-225ENST00000601912 NPLOC4Q8TAT6 608 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 SEPT1Q8WYJ6 367 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 SLC39A2Q9NP94 309 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 RWDD2AQ9UIY3 292 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 CTNND2Q9UQB3 1225 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 MAPK8IP1Q9UQF2 711 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 SYNRGQ9UMZ2 1314 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 FRMD3A2A2Y4 597 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 HOXC6P09630 235 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 RGS2P41220 211 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 RARRES1P49788 294 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 CACNB1Q02641 598 aaPredicted RBP19.98■□□□□ 0.79
VRK3-225ENST00000601912 FAM26FQ5R3K3 315 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 PADI6Q6TGC4 694 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 CCDC60Q8IWA6 550 aaPredicted RBP19.98■□□□□ 0.79
VRK3-225ENST00000601912 NELFBQ8WX92 580 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 DHTKD1Q96HY7 919 aaPredicted RBP19.98■□□□□ 0.79
VRK3-225ENST00000601912 ABHD16BQ9H3Z7 469 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 ZNF302Q9NR11 478 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 PDGFCQ9NRA1 345 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 COL4A3BPQ9Y5P4 624 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 DOCK5Q9H7D0 1870 aa19.98■□□□□ 0.79
VRK3-225ENST00000601912 NOP56O00567 594 aaKnown RBP19.97■□□□□ 0.79
VRK3-225ENST00000601912 SNAI1O95863 264 aaPredicted RBP19.97■□□□□ 0.79
VRK3-225ENST00000601912 GAP43P17677 238 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 GUCY2CP25092 1073 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 CCDC173Q0VFZ6 552 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 SPATA1Q5VX52 437 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 FAM160B1Q5W0V3 765 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 TAPT1Q6NXT6 567 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 TRMT44Q8IYL2 757 aaKnown RBP19.97■□□□□ 0.79
VRK3-225ENST00000601912 ODF2LQ9ULJ1 636 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 NFE2L3Q9Y4A8 694 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 RBM47A0AV96 593 aaKnown RBP19.97■□□□□ 0.79
VRK3-225ENST00000601912 FAM13AO94988 1023 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 FCGRTP55899 365 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 STX17P56962 302 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 TPD52L1Q16890 204 aaPredicted RBP19.97■□□□□ 0.79
VRK3-225ENST00000601912 XKR9Q5GH70 373 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 KIAA0895Q8NCT3 520 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 HPS3Q969F9 1004 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 SPATA33Q96N06 139 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 TELO2Q9Y4R8 837 aa19.97■□□□□ 0.79
VRK3-225ENST00000601912 MAFBQ9Y5Q3 323 aaPredicted RBP19.97■□□□□ 0.79
VRK3-225ENST00000601912 IGSF9BQ9UPX0 1349 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 IGKV6D-21A0A0A0MT36 114 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 GSTTP1A0A1W2PQM5 241 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 BICDL2A1A5D9 508 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 KIF20AO95235 890 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 ADCY5O95622 1261 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 XKR3Q5GH77 459 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 UTP14CQ5TAP6 766 aaKnown RBP19.96■□□□□ 0.79
VRK3-225ENST00000601912 SARM1Q6SZW1 724 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 TRMT1LQ7Z2T5 733 aaKnown RBP19.96■□□□□ 0.79
VRK3-225ENST00000601912 USP6NLQ92738 828 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 TIPINQ9BVW5 301 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 TRIM5Q9C035 493 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 AZI2Q9H6S1 392 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 FANCLQ9NW38 375 aa19.96■□□□□ 0.79
VRK3-225ENST00000601912 ZNF862O60290 1169 aa19.95■□□□□ 0.78
VRK3-225ENST00000601912 TCF7P36402 384 aaPredicted RBP19.95■□□□□ 0.78
VRK3-225ENST00000601912 PRKCEQ02156 737 aa19.95■□□□□ 0.78
VRK3-225ENST00000601912 ACVR2BQ13705 512 aa19.95■□□□□ 0.78
VRK3-225ENST00000601912 LAMC2Q13753 1193 aa19.95■□□□□ 0.78
VRK3-225ENST00000601912 ANO5Q75V66 913 aa19.95■□□□□ 0.78
VRK3-225ENST00000601912 GUF1Q8N442 669 aaKnown RBP19.95■□□□□ 0.78
VRK3-225ENST00000601912 GPR20Q99678 358 aa19.95■□□□□ 0.78
VRK3-225ENST00000601912 APBA2Q99767 749 aa19.95■□□□□ 0.78
VRK3-225ENST00000601912 KATNBL1Q9H079 304 aa19.95■□□□□ 0.78
VRK3-225ENST00000601912 PARVGQ9HBI0 331 aa19.95■□□□□ 0.78
VRK3-225ENST00000601912 GH1P01241 217 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 CYP2B6P20813 491 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 MAP2K2P36507 400 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 STAT5BP51692 787 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 IRF5Q13568 498 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 MYOCDQ8IZQ8 938 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 AFAP1L1Q8TED9 768 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 CEP170P1Q96L14 293 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 MED15Q96RN5 788 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 TBC1D7Q9P0N9 293 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 SEL1LQ9UBV2 794 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 SEPT9Q9UHD8 586 aaPredicted RBP19.94■□□□□ 0.78
VRK3-225ENST00000601912 GJD2Q9UKL4 321 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 ZHX1Q9UKY1 873 aaPredicted RBP19.94■□□□□ 0.78
VRK3-225ENST00000601912 DOCK3Q8IZD9 2030 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 CDK11BP21127 795 aaKnown RBP19.94■□□□□ 0.78
VRK3-225ENST00000601912 CCNE1P24864 410 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 LACTBP83111 547 aaPredicted RBP19.94■□□□□ 0.78
VRK3-225ENST00000601912 HSDL1Q3SXM5 330 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 OLFML2BQ68BL8 750 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 IQSEC1Q6DN90 963 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 SFR1Q86XK3 245 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 MYCT1Q8N699 235 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 COPS5Q92905 334 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 P2RX5Q93086 422 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms