RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, human

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-222	ENST00000601869	RAD54L	Q92698	747 aa		21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	SPATS2L	Q9NUQ6	558 aa	Known RBP	21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	SLIT2	O94813	1529 aa		21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	LUC7L3	O95232	432 aa	Known RBP	21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	AGT	P01019	485 aa		21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	TEC	P42680	631 aa		21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	TMEM266	Q2M3C6	531 aa		21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	NAIF1	Q69YI7	327 aa	Predicted RBP	21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	TCP11	Q8WWU5	503 aa		21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	CNKSR1	Q969H4	720 aa		21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	MAD2L2	Q9UI95	211 aa		21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	21.26	■□□□□ 0.99
STRN4-222	ENST00000601869	NQO1	P15559	274 aa	Known RBP	21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	GBP1	P32455	592 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	LETM2	Q2VYF4	491 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	PEX26	Q7Z412	305 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	COL23A1	Q86Y22	540 aa	Predicted RBP	21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	FAM133A	Q8N9E0	248 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	TPCN2	Q8NHX9	752 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	NEK9	Q8TD19	979 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	PLCD4	Q9BRC7	762 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	AP1M1	Q9BXS5	423 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	SLC24A3	Q9HC58	644 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	C6orf50	Q9HD87	102 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	DCP1A	Q9NPI6	582 aa	Predicted RBP	21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	AMACR	Q9UHK6	382 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	PNMA2	Q9UL42	364 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	STXBP5L	Q9Y2K9	1186 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	BACH1	O14867	736 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	FLOT1	O75955	427 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	CLTA	P09496	248 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	GCK	P35557	465 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	BARGIN	Q6ZT62	677 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	NAP1L3	Q99457	506 aa	Predicted RBP	21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	TMEM109	Q9BVC6	243 aa		21.25	■□□□□ 0.99
STRN4-222	ENST00000601869	FRMD3	A2A2Y4	597 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	FAM187A	A6NFU0	413 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	PRKCI	P41743	596 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	SARNP	P82979	210 aa	Known RBP	21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	POU5F1	Q01860	360 aa	Known RBP	21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	CHRND	Q07001	517 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	ADCY2	Q08462	1091 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	ITPK1	Q13572	414 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	PNMA8A	Q86V59	439 aa	Predicted RBP	21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	GPIHBP1	Q8IV16	184 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	ZC3H3	Q8IXZ2	948 aa	Known RBP	21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	PNMA5	Q96PV4	448 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	SH3GL3	Q99963	347 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	PABPC3	Q9H361	631 aa	Known RBP	21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	CNOT7	Q9UIV1	285 aa	Known RBP	21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	CORO1C	Q9ULV4	474 aa	Predicted RBP	21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	TULP1	O00294	542 aa	Predicted RBP	21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	TRAF5	O00463	557 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	TTI1	O43156	1089 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	CAND2	O75155	1236 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	PDIA5	Q14554	519 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	C6orf118	Q5T5N4	469 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	DENND2C	Q68D51	928 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	BTNL9	Q6UXG8	535 aa		21.24	■□□□□ 0.99
STRN4-222	ENST00000601869	PDE6C	P51160	858 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	CCNH	P51946	323 aa	Predicted RBP	21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	CCNG1	P51959	295 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	MKRN4P	Q13434	485 aa	Predicted RBP	21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	SUSD4	Q5VX71	490 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	PPP4R3CP	Q6ZMV5	832 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	VPS36	Q86VN1	386 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	MDM1	Q8TC05	714 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	SPDL1	Q96EA4	605 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	IFT74	Q96LB3	600 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	SPZ1	Q9BXG8	430 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	INTS9	Q9NV88	658 aa	Known RBP	21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	NENF	Q9UMX5	172 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	EPS15	P42566	896 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	DRG2	P55039	364 aa	Known RBP	21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	PTEN	P60484	403 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	TMEM119	Q4V9L6	283 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	TBC1D1	Q86TI0	1168 aa	Predicted RBP	21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	LRRC34	Q8IZ02	419 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	AGAP11	Q8TF27	550 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	ZNF483	Q8TF39	744 aa	Predicted RBP	21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	ATP8B4	Q8TF62	1192 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	HES6	Q96HZ4	224 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	NAGPA	Q9UK23	515 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	ATP8A1	Q9Y2Q0	1164 aa		21.23	■□□□□ 0.99
STRN4-222	ENST00000601869	SMNDC1	O75940	238 aa	Known RBP eCLIP	21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	BRD2	P25440	801 aa	Known RBP	21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	UBE4A	Q14139	1066 aa		21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	DHX34	Q14147	1143 aa	Known RBP	21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	CAPRIN2	Q6IMN6	1127 aa	Known RBP	21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	DYM	Q7RTS9	669 aa		21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	DDX12P	Q92771	950 aa		21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	SAAL1	Q96ER3	474 aa		21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	THOC1	Q96FV9	657 aa	Known RBP	21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	MTMR9	Q96QG7	549 aa		21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	SELENOS	Q9BQE4	189 aa		21.22	■□□□□ 0.99
STRN4-222	ENST00000601869	RGS16	O15492	202 aa	Predicted RBP	21.21	■□□□□ 0.99
STRN4-222	ENST00000601869	GFPT2	O94808	682 aa		21.21	■□□□□ 0.99
STRN4-222	ENST00000601869	CAMTA2	O94983	1202 aa		21.21	■□□□□ 0.99
STRN4-222	ENST00000601869	OAS1	P00973	400 aa	Known RBP	21.21	■□□□□ 0.99
STRN4-222	ENST00000601869	PMS2	P54278	862 aa		21.21	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms