RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 MUTP22033 750 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 TXKP42681 527 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 JAK3P52333 1124 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 BEX3Q00994 111 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 CEBPZQ03701 1054 aaKnown RBP13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 FOXD4L6Q3SYB3 417 aaPredicted RBP13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 AXDND1Q5T1B0 1012 aaPredicted RBP13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 TMEM63BQ5T3F8 832 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 FOXD4L3Q6VB84 417 aaPredicted RBP13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 CYFIP1Q7L576 1253 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 DHX37Q8IY37 1157 aaKnown RBP13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 GBP4Q96PP9 640 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 TCEAL9Q9UHQ7 104 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 YBX2Q9Y2T7 364 aaKnown RBP13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 TNFRSF10AO00220 468 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 PPFIA4O75335 1185 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 CCNE2O96020 404 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 MARCKSP29966 332 aaPredicted RBP13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 CYP2C18P33260 490 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 ACTR2P61160 394 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 PPIGQ13427 754 aaKnown RBP eCLIP13.08□□□□□ -0.321e-6■■■■□ 25.5
CHMP2A-207ENST00000600804 EPHA7Q15375 998 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 ADALQ6DHV7 355 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 ABHD15Q6UXT9 468 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 TLK2Q86UE8 772 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 NEK9Q8TD19 979 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 SEPT1Q8WYJ6 367 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 GLT1D1Q96MS3 346 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 GPR20Q99678 358 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 UNC45AQ9H3U1 944 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 PCDHA7Q9UN72 937 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 PCDHA10Q9Y5I2 948 aa13.08□□□□□ -0.32
CHMP2A-207ENST00000600804 A0A0U1RQG5 324 aaPredicted RBP13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 FAM237AA0A1B0GTK4 181 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 A0A1W2PQ27 194 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 A0A1W2PQ64 194 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 A0A1W2PQD8 194 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 KPNA6O60684 536 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 LGR5O75473 907 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 COL9A1P20849 921 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 TECP42680 631 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 CPT1AP50416 773 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 HSDL1Q3SXM5 330 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 BRDTQ58F21 947 aaPredicted RBP13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 HYIQ5T013 277 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 SLC43A3Q8NBI5 491 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 OR6J1Q8NGC5 347 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 COPS5Q92905 334 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 GJA10Q969M2 543 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 CHAMP1Q96JM3 812 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 SPATA33Q96N06 139 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 HSD17B14Q9BPX1 270 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 POLR3CQ9BUI4 534 aaPredicted RBP13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 CCSER1Q9C0I3 900 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 AP5M1Q9H0R1 490 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 SPC25Q9HBM1 224 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 DISC1Q9NRI5 854 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 LRWD1Q9UFC0 647 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 LOXHD1Q8IVV2 1947 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 MROH7Q68CQ1 1323 aa13.07□□□□□ -0.32
CHMP2A-207ENST00000600804 GSTTP1A0A1W2PQM5 241 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 NOP56O00567 594 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 DKC1O60832 514 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 LYPLA2O95372 231 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 P4HBP07237 508 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 PSAPP07602 524 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 MMP3P08254 477 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 CMA1P23946 247 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 RPA1P27694 616 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 ME1P48163 572 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 SLC26A2P50443 739 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 DGKDQ16760 1214 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 GNASQ5JWF2 1037 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 HAUS3Q68CZ6 603 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 MIS18BP1Q6P0N0 1132 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 CXCL17Q6UXB2 119 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 MIER3Q7Z3K6 550 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 PCSK9Q8NBP7 692 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 ERMNQ8TAM6 284 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 AFAP1L1Q8TED9 768 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 AFG1LQ8WV93 481 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 CSRNP2Q9H175 543 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 WNT8AQ9H1J5 351 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 NKX2-4Q9H2Z4 354 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 BCAS3Q9H6U6 928 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 TUFT1Q9NNX1 390 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 IL23AQ9NPF7 189 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 PKD2L1Q9P0L9 805 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 KAT6AQ92794 2004 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 EMSYQ7Z589 1322 aa13.06□□□□□ -0.32
CHMP2A-207ENST00000600804 POTEMA6NI47 508 aa13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 EML1O00423 815 aa13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 DYNC1LI2O43237 492 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms