RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 RCOR1Q9UKL0 485 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 NOD1Q9Y239 953 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 TELO2Q9Y4R8 837 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 DDX11L8A8MPP1 907 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 DCDC2CA8MYV0 355 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 HAS3O00219 553 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 SLC26A4O43511 780 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 FXR1P51114 621 aaKnown RBP eCLIP18.7■□□□□ 0.58
USHBP1-210ENST00000600286 BANK1Q8NDB2 785 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 ATP8B4Q8TF62 1192 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 PCYT2Q99447 389 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 LXNQ9BS40 222 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 PCDH10Q9P2E7 1040 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 NRCAMQ92823 1304 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 KDM3AQ9Y4C1 1321 aa18.7■□□□□ 0.58
USHBP1-210ENST00000600286 C17orf102A2RUQ5 167 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 GOLGA6L4A6NEF3 574 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 CUTAO60888 179 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 SLITRK3O94933 977 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 RPA1P27694 616 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 CYP4A11Q02928 519 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 CTTNQ14247 550 aaKnown RBP18.69■□□□□ 0.58
USHBP1-210ENST00000600286 PLCB4Q15147 1175 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 ZNF484Q5JVG2 852 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 C1orf53Q5VUE5 145 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 TRMT1LQ7Z2T5 733 aaKnown RBP18.69■□□□□ 0.58
USHBP1-210ENST00000600286 C4orf19Q8IY42 314 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 EXOC8Q8IYI6 725 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 KCTD17Q8N5Z5 321 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 NACC1Q96RE7 527 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 HSD17B14Q9BPX1 270 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 NT5C3AQ9H0P0 336 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 RNPEPQ9H4A4 650 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 RGL1Q9NZL6 768 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 CCDC39Q9UFE4 941 aa18.69■□□□□ 0.58
USHBP1-210ENST00000600286 OATP04181 439 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 SMIM10L2AP0DMW4 78 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 SMIM10L2BP0DMW5 78 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 XRCC6P12956 609 aaKnown RBP eCLIP18.68■□□□□ 0.58
USHBP1-210ENST00000600286 PRKCEQ02156 737 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 ZRSR1Q15695 479 aaKnown RBP18.68■□□□□ 0.58
USHBP1-210ENST00000600286 IL17AQ16552 155 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 CABP7Q86V35 215 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 SESTD1Q86VW0 696 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 ZNF579Q8NAF0 562 aaKnown RBP18.68■□□□□ 0.58
USHBP1-210ENST00000600286 LEO1Q8WVC0 666 aaPredicted RBP18.68■□□□□ 0.58
USHBP1-210ENST00000600286 CSRNP2Q9H175 543 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 HDAC6Q9UBN7 1215 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 FBXO2Q9UK22 296 aaPredicted RBP18.68■□□□□ 0.58
USHBP1-210ENST00000600286 IGSF9BQ9UPX0 1349 aa18.68■□□□□ 0.58
USHBP1-210ENST00000600286 LYPLA2O95372 231 aa18.67■□□□□ 0.58
USHBP1-210ENST00000600286 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
USHBP1-210ENST00000600286 SLC43A3Q8NBI5 491 aa18.67■□□□□ 0.58
USHBP1-210ENST00000600286 TOX2Q96NM4 488 aa18.67■□□□□ 0.58
USHBP1-210ENST00000600286 FAM13BQ9NYF5 915 aa18.67■□□□□ 0.58
USHBP1-210ENST00000600286 SEPT9Q9UHD8 586 aaPredicted RBP18.67■□□□□ 0.58
USHBP1-210ENST00000600286 DNM3Q9UQ16 869 aa18.67■□□□□ 0.58
USHBP1-210ENST00000600286 ATP11BQ9Y2G3 1177 aa18.67■□□□□ 0.58
USHBP1-210ENST00000600286 PPME1Q9Y570 386 aa18.67■□□□□ 0.58
USHBP1-210ENST00000600286 PQBP1O60828 265 aaKnown RBP18.66■□□□□ 0.58
USHBP1-210ENST00000600286 INSRRP14616 1297 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 YWHABP31946 246 aaKnown RBP18.66■□□□□ 0.58
USHBP1-210ENST00000600286 CDK7P50613 346 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 RTP1P59025 263 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 IGBP1P78318 339 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 GRIK4Q16099 956 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 DPF3Q92784 378 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 CLIC6Q96NY7 704 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 JPH2Q9BR39 696 aaPredicted RBP18.66■□□□□ 0.58
USHBP1-210ENST00000600286 ANKEF1Q9NU02 776 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 SETD4Q9NVD3 440 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 GTF2IRD1Q9UHL9 959 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 KIAA1024Q9UPX6 916 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 COL1A2P08123 1366 aa18.66■□□□□ 0.58
USHBP1-210ENST00000600286 MAGEB2O15479 319 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 ZNF862O60290 1169 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 MED24O75448 989 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 RPLP2P05387 115 aaKnown RBP18.65■□□□□ 0.58
USHBP1-210ENST00000600286 CDC25AP30304 524 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 PTGISQ16647 500 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 UGCGQ16739 394 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 CCDC155Q8N6L0 562 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 RETREG2Q8NC44 543 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 CEP170P1Q96L14 293 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 PYM1Q9BRP8 204 aaKnown RBP18.65■□□□□ 0.58
USHBP1-210ENST00000600286 NIFKQ9BYG3 293 aaKnown RBP18.65■□□□□ 0.58
USHBP1-210ENST00000600286 CCSER1Q9C0I3 900 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 PRKAG2Q9UGJ0 569 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 PCDHA7Q9UN72 937 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 GRIN2DO15399 1336 aa18.65■□□□□ 0.58
USHBP1-210ENST00000600286 PP2D1A8MPX8 630 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 SPATA31C1P0DKV0 1188 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 ATP4AP20648 1035 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 TMOD1P28289 359 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 TLE2Q04725 743 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 TBC1D8BQ0IIM8 1120 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 SNX17Q15036 470 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 LRRC26Q2I0M4 334 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 TRIM60Q495X7 471 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms