RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 CCDC39Q9UFE4 941 aa21.29■■□□□ 1
COPE-209ENST00000599964 HBP1O60381 514 aa21.28■■□□□ 1
COPE-209ENST00000599964 LYPLA2O95372 231 aa21.28■■□□□ 1
COPE-209ENST00000599964 OATP04181 439 aa21.28■■□□□ 1
COPE-209ENST00000599964 GNAT1P11488 350 aa21.28■■□□□ 1
COPE-209ENST00000599964 COL6A1P12109 1028 aa21.28■■□□□ 1
COPE-209ENST00000599964 CDC25AP30304 524 aa21.28■■□□□ 1
COPE-209ENST00000599964 PSMC6P62333 389 aa21.28■■□□□ 1
COPE-209ENST00000599964 PTPN11Q06124 597 aaPredicted RBP21.28■■□□□ 1
COPE-209ENST00000599964 ITGA7Q13683 1181 aa21.28■■□□□ 1
COPE-209ENST00000599964 PLCB4Q15147 1175 aa21.28■■□□□ 1
COPE-209ENST00000599964 FAM47CQ5HY64 1035 aa21.28■■□□□ 1
COPE-209ENST00000599964 ADALQ6DHV7 355 aa21.28■■□□□ 1
COPE-209ENST00000599964 NFRKBQ6P4R8 1299 aa21.28■■□□□ 1
COPE-209ENST00000599964 CCDC43Q96MW1 224 aaKnown RBP21.28■■□□□ 1
COPE-209ENST00000599964 NACC1Q96RE7 527 aa21.28■■□□□ 1
COPE-209ENST00000599964 CCSER1Q9C0I3 900 aa21.28■■□□□ 1
COPE-209ENST00000599964 KIAA0100Q14667 2235 aaKnown RBP21.28■■□□□ 1
COPE-209ENST00000599964 ZNF862O60290 1169 aa21.27■■□□□ 1
COPE-209ENST00000599964 MED24O75448 989 aa21.27■■□□□ 1
COPE-209ENST00000599964 SPATA31C1P0DKV0 1188 aa21.27■■□□□ 1
COPE-209ENST00000599964 XRCC6P12956 609 aaKnown RBP eCLIP21.27■■□□□ 1
COPE-209ENST00000599964 MNX1P50219 401 aaPredicted RBP21.27■■□□□ 1
COPE-209ENST00000599964 SOX10P56693 466 aa21.27■■□□□ 1
COPE-209ENST00000599964 ZRSR1Q15695 479 aaKnown RBP21.27■■□□□ 1
COPE-209ENST00000599964 NBPF20Q3BBV1 942 aa21.27■■□□□ 1
COPE-209ENST00000599964 AXDND1Q5T1B0 1012 aaPredicted RBP21.27■■□□□ 1
COPE-209ENST00000599964 CLEC17AQ6ZS10 378 aa21.27■■□□□ 1
COPE-209ENST00000599964 SYMPKQ92797 1274 aaKnown RBP21.27■■□□□ 1
COPE-209ENST00000599964 RNPEPQ9H4A4 650 aa21.27■■□□□ 1
COPE-209ENST00000599964 COL1A2P08123 1366 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 WDR81Q562E7 1941 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 RRN3P2A6NIE6 340 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 DDX11L8A8MPP1 907 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 SMIM10L2AP0DMW4 78 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 SMIM10L2BP0DMW5 78 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 YWHABP31946 246 aaKnown RBP21.26■□□□□ 0.99
COPE-209ENST00000599964 PPFIA1Q13136 1202 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 ZNF484Q5JVG2 852 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 SPECC1Q5M775 1068 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 HYIQ5T013 277 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 TRMT1LQ7Z2T5 733 aaKnown RBP21.26■□□□□ 0.99
COPE-209ENST00000599964 SESTD1Q86VW0 696 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 DIS3LQ8TF46 1054 aaKnown RBP21.26■□□□□ 0.99
COPE-209ENST00000599964 EPSTI1Q96J88 318 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 PYM1Q9BRP8 204 aaKnown RBP21.26■□□□□ 0.99
COPE-209ENST00000599964 DDX19AQ9NUU7 478 aaKnown RBP21.26■□□□□ 0.99
COPE-209ENST00000599964 SEPT9Q9UHD8 586 aaPredicted RBP21.26■□□□□ 0.99
COPE-209ENST00000599964 KIAA1024Q9UPX6 916 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 DNM3Q9UQ16 869 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 SCN10AQ9Y5Y9 1956 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 MROH7Q68CQ1 1323 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 NRCAMQ92823 1304 aa21.26■□□□□ 0.99
COPE-209ENST00000599964 GOLGA6L22H0YM25 854 aa21.25■□□□□ 0.99
COPE-209ENST00000599964 ARVCFO00192 962 aa21.25■□□□□ 0.99
COPE-209ENST00000599964 ATP4AP20648 1035 aa21.25■□□□□ 0.99
COPE-209ENST00000599964 CMA1P23946 247 aa21.25■□□□□ 0.99
COPE-209ENST00000599964 POTEGQ6S5H5 508 aa21.25■□□□□ 0.99
COPE-209ENST00000599964 SHC4Q6S5L8 630 aa21.25■□□□□ 0.99
COPE-209ENST00000599964 SLC39A5Q6ZMH5 540 aa21.25■□□□□ 0.99
COPE-209ENST00000599964 MMTAG2Q9BU76 263 aaKnown RBP21.25■□□□□ 0.99
COPE-209ENST00000599964 ANKEF1Q9NU02 776 aa21.25■□□□□ 0.99
COPE-209ENST00000599964 PPME1Q9Y570 386 aa21.25■□□□□ 0.99
COPE-209ENST00000599964 A0A1W2PQ27 194 aa21.24■□□□□ 0.99
COPE-209ENST00000599964 A0A1W2PQ64 194 aa21.24■□□□□ 0.99
COPE-209ENST00000599964 A0A1W2PQD8 194 aa21.24■□□□□ 0.99
COPE-209ENST00000599964 C17orf102A2RUQ5 167 aa21.24■□□□□ 0.99
COPE-209ENST00000599964 INSRRP14616 1297 aa21.24■□□□□ 0.99
COPE-209ENST00000599964 RESP18Q5W5W9 173 aa21.24■□□□□ 0.99
COPE-209ENST00000599964 CCDC73Q6ZRK6 1079 aa21.24■□□□□ 0.99
COPE-209ENST00000599964 NIFKQ9BYG3 293 aaKnown RBP21.24■□□□□ 0.99
COPE-209ENST00000599964 WRAP73Q9P2S5 460 aaPredicted RBP21.24■□□□□ 0.99
COPE-209ENST00000599964 HDAC6Q9UBN7 1215 aa21.24■□□□□ 0.99
COPE-209ENST00000599964 DBR1Q9UK59 544 aaKnown RBP21.24■□□□□ 0.99
COPE-209ENST00000599964 KARSQ15046 597 aaKnown RBP21.23■□□□□ 0.99
COPE-209ENST00000599964 GRIK4Q16099 956 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 XKR9Q5GH70 373 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 C1orf53Q5VUE5 145 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 RRAGBQ5VZM2 374 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 USP49Q70CQ1 688 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 EXOC8Q8IYI6 725 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 SLC43A3Q8NBI5 491 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 TMEM87AQ8NBN3 555 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 GTF2IRD1Q9UHL9 959 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 NOD1Q9Y239 953 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 GRIN2DO15399 1336 aa21.23■□□□□ 0.99
COPE-209ENST00000599964 TLR3O15455 904 aaKnown RBP21.22■□□□□ 0.99
COPE-209ENST00000599964 ATN1P54259 1190 aaPredicted RBP21.22■□□□□ 0.99
COPE-209ENST00000599964 IGBP1P78318 339 aa21.22■□□□□ 0.99
COPE-209ENST00000599964 GRB10Q13322 594 aa21.22■□□□□ 0.99
COPE-209ENST00000599964 TMEM119Q4V9L6 283 aa21.22■□□□□ 0.99
COPE-209ENST00000599964 ANO5Q75V66 913 aa21.22■□□□□ 0.99
COPE-209ENST00000599964 UBE2Q1Q7Z7E8 422 aa21.22■□□□□ 0.99
COPE-209ENST00000599964 PIGOQ8TEQ8 1089 aa21.22■□□□□ 0.99
COPE-209ENST00000599964 MRPS27Q92552 414 aaKnown RBP21.22■□□□□ 0.99
COPE-209ENST00000599964 CEP170P1Q96L14 293 aa21.22■□□□□ 0.99
COPE-209ENST00000599964 PNMA5Q96PV4 448 aa21.22■□□□□ 0.99
COPE-209ENST00000599964 JPH2Q9BR39 696 aaPredicted RBP21.22■□□□□ 0.99
COPE-209ENST00000599964 CYP26B1Q9NR63 512 aa21.22■□□□□ 0.99
COPE-209ENST00000599964 SETD4Q9NVD3 440 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms