RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 FGBP02675 491 aa19.9■□□□□ 0.78
USHBP1-209ENST00000598570 SMAD3P84022 425 aaKnown RBP19.9■□□□□ 0.78
USHBP1-209ENST00000598570 TARBP2Q15633 366 aaKnown RBP19.9■□□□□ 0.78
USHBP1-209ENST00000598570 PDXDC2PQ6P474 469 aa19.9■□□□□ 0.78
USHBP1-209ENST00000598570 SLFN12Q8IYM2 578 aa19.9■□□□□ 0.78
USHBP1-209ENST00000598570 INTS4Q96HW7 963 aaKnown RBP19.9■□□□□ 0.78
USHBP1-209ENST00000598570 UIMC1Q96RL1 719 aa19.9■□□□□ 0.78
USHBP1-209ENST00000598570 CEP89Q96ST8 783 aa19.9■□□□□ 0.78
USHBP1-209ENST00000598570 NIFKQ9BYG3 293 aaKnown RBP19.9■□□□□ 0.78
USHBP1-209ENST00000598570 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.9■□□□□ 0.78
USHBP1-209ENST00000598570 CHD9Q3L8U1 2897 aa19.9■□□□□ 0.78
USHBP1-209ENST00000598570 KIF28PB7ZC32 967 aa19.89■□□□□ 0.77
USHBP1-209ENST00000598570 MARK3P27448 753 aa19.89■□□□□ 0.77
USHBP1-209ENST00000598570 GUCY1B3Q02153 619 aa19.89■□□□□ 0.77
USHBP1-209ENST00000598570 MGAT3Q09327 533 aa19.89■□□□□ 0.77
USHBP1-209ENST00000598570 FAM109BQ6ICB4 259 aaPredicted RBP19.89■□□□□ 0.77
USHBP1-209ENST00000598570 RUFY4Q6ZNE9 571 aa19.89■□□□□ 0.77
USHBP1-209ENST00000598570 FAM43BQ6ZT52 329 aaPredicted RBP19.89■□□□□ 0.77
USHBP1-209ENST00000598570 C4orf32Q8N8J7 132 aa19.89■□□□□ 0.77
USHBP1-209ENST00000598570 GABBR1Q9UBS5 961 aa19.89■□□□□ 0.77
USHBP1-209ENST00000598570 TUBE1Q9UJT0 475 aa19.89■□□□□ 0.77
USHBP1-209ENST00000598570 SMIM35A0A1B0GVV1 85 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 EML1O00423 815 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 BACH1O14867 736 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 ACRP10323 421 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 GJB2P29033 226 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 TOB1P50616 345 aaPredicted RBP19.88■□□□□ 0.77
USHBP1-209ENST00000598570 MTHFD1LQ6UB35 978 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 NME8Q8N427 588 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 LINC01465Q8N7H1 131 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 FAM167AQ96KS9 214 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 SQORQ9Y6N5 450 aa19.88■□□□□ 0.77
USHBP1-209ENST00000598570 KDM3AQ9Y4C1 1321 aa19.87■□□□□ 0.77
USHBP1-209ENST00000598570 RSPH10B2B2RC85 870 aa19.87■□□□□ 0.77
USHBP1-209ENST00000598570 CHRNA1P02708 482 aa19.87■□□□□ 0.77
USHBP1-209ENST00000598570 RSPH10BP0C881 870 aa19.87■□□□□ 0.77
USHBP1-209ENST00000598570 THPOP40225 353 aa19.87■□□□□ 0.77
USHBP1-209ENST00000598570 UGCGQ16739 394 aa19.87■□□□□ 0.77
USHBP1-209ENST00000598570 RNPC3Q96LT9 517 aaKnown RBP19.87■□□□□ 0.77
USHBP1-209ENST00000598570 HSD17B14Q9BPX1 270 aa19.87■□□□□ 0.77
USHBP1-209ENST00000598570 CXXC1Q9P0U4 656 aaPredicted RBP19.87■□□□□ 0.77
USHBP1-209ENST00000598570 TCEAL9Q9UHQ7 104 aa19.87■□□□□ 0.77
USHBP1-209ENST00000598570 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.86■□□□□ 0.77
USHBP1-209ENST00000598570 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.86■□□□□ 0.77
USHBP1-209ENST00000598570 BAIAP3O94812 1187 aa19.86■□□□□ 0.77
USHBP1-209ENST00000598570 BAG4O95429 457 aaKnown RBP19.86■□□□□ 0.77
USHBP1-209ENST00000598570 C22orf31O95567 290 aa19.86■□□□□ 0.77
USHBP1-209ENST00000598570 KLRC1P26715 233 aa19.86■□□□□ 0.77
USHBP1-209ENST00000598570 EPHA7Q15375 998 aa19.86■□□□□ 0.77
USHBP1-209ENST00000598570 PLEKHG4Q58EX7 1191 aa19.86■□□□□ 0.77
USHBP1-209ENST00000598570 MIER3Q7Z3K6 550 aa19.86■□□□□ 0.77
USHBP1-209ENST00000598570 KIAA0319LQ8IZA0 1049 aa19.86■□□□□ 0.77
USHBP1-209ENST00000598570 NRBP2Q9NSY0 501 aa19.86■□□□□ 0.77
USHBP1-209ENST00000598570 TRPC6Q9Y210 931 aa19.86■□□□□ 0.77
USHBP1-209ENST00000598570 EVPLQ92817 2033 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 IGKV6-21A0A0C4DH24 114 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 NEMFO60524 1076 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 LYPLA2O95372 231 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 OATP04181 439 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 FOSBP53539 338 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 PSMC5P62195 406 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 TCTN1Q2MV58 587 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 XKR3Q5GH77 459 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 PHOSPHO2Q8TCD6 241 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 OSBPL7Q9BZF2 842 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 TMEM60Q9H2L4 133 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 PCDHA12Q9UN75 941 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 CEP131Q9UPN4 1083 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 SMC3Q9UQE7 1217 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 SAMM50Q9Y512 469 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 SIP14410 1827 aa19.85■□□□□ 0.77
USHBP1-209ENST00000598570 MAGEB2O15479 319 aa19.84■□□□□ 0.77
USHBP1-209ENST00000598570 P4HBP07237 508 aaKnown RBP19.84■□□□□ 0.77
USHBP1-209ENST00000598570 CALCRLQ16602 461 aa19.84■□□□□ 0.77
USHBP1-209ENST00000598570 CNKSR3Q6P9H4 555 aa19.84■□□□□ 0.77
USHBP1-209ENST00000598570 C4orf19Q8IY42 314 aa19.84■□□□□ 0.77
USHBP1-209ENST00000598570 ZNF710Q8N1W2 664 aa19.84■□□□□ 0.77
USHBP1-209ENST00000598570 TRAPPC12Q8WVT3 735 aa19.84■□□□□ 0.77
USHBP1-209ENST00000598570 LRCH3Q96II8 777 aa19.84■□□□□ 0.77
USHBP1-209ENST00000598570 ABHD14A-ACY1A0A1B0GW23 586 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 SLITRK3O94933 977 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 QARSP47897 775 aaKnown RBP19.83■□□□□ 0.77
USHBP1-209ENST00000598570 PRKCEQ02156 737 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 ANO5Q75V66 913 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 OTOP2Q7RTS6 562 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 DEFB128Q7Z7B8 93 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 RSPH3Q86UC2 560 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 DNAJB3Q8WWF6 145 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 ZBTB10Q96DT7 871 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 MTIF3Q9H2K0 278 aaKnown RBP19.83■□□□□ 0.77
USHBP1-209ENST00000598570 TTC12Q9H892 705 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-209ENST00000598570 WRAP73Q9P2S5 460 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-209ENST00000598570 PPME1Q9Y570 386 aa19.83■□□□□ 0.77
USHBP1-209ENST00000598570 TMEM265A0A087WTH1 108 aa19.82■□□□□ 0.76
USHBP1-209ENST00000598570 K7ELQ4 463 aaPredicted RBP19.82■□□□□ 0.76
USHBP1-209ENST00000598570 CHMP2AO43633 222 aa19.82■□□□□ 0.76
USHBP1-209ENST00000598570 EFCAB14O75071 495 aa19.82■□□□□ 0.76
USHBP1-209ENST00000598570 ACTN1P12814 892 aa19.82■□□□□ 0.76
USHBP1-209ENST00000598570 MRPS6P82932 125 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms