RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 APBB2Q92870 758 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 NAP1L4Q99733 375 aaKnown RBP18.84■□□□□ 0.61
USHBP1-208ENST00000598309 GJB4Q9NTQ9 266 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 PCDHA2Q9Y5H9 948 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 KIF28PB7ZC32 967 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 JAK2O60674 1132 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 PSMD10O75832 226 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 CHRNA1P02708 482 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 KRT2P35908 639 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 JAK3P52333 1124 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 ZNF484Q5JVG2 852 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 PPP4R3AQ6IN85 833 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 IL27Q8NEV9 243 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 ETNPPLQ8TBG4 499 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 OXER1Q8TDS5 423 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 DNAJB3Q8WWF6 145 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 FAM167AQ96KS9 214 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 ZSCAN31Q96LW9 406 aaPredicted RBP18.83■□□□□ 0.6
USHBP1-208ENST00000598309 LLPHQ9BRT6 129 aaKnown RBP18.83■□□□□ 0.6
USHBP1-208ENST00000598309 SH2B1Q9NRF2 756 aaPredicted RBP18.83■□□□□ 0.6
USHBP1-208ENST00000598309 DISC1Q9NRI5 854 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 DDX25Q9UHL0 483 aaKnown RBP18.83■□□□□ 0.6
USHBP1-208ENST00000598309 SAMM50Q9Y512 469 aa18.83■□□□□ 0.6
USHBP1-208ENST00000598309 SMIM35A0A1B0GVV1 85 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 DTNBO60941 627 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 ATP4AP20648 1035 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 DEFB103AP81534 67 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 MRPS6P82932 125 aaKnown RBP18.82■□□□□ 0.6
USHBP1-208ENST00000598309 LETM2Q2VYF4 491 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 PPP2R2DQ66LE6 453 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 MTHFD1LQ6UB35 978 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 B3GNT9Q6UX72 402 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 PIK3AP1Q6ZUJ8 805 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 TRAPPC12Q8WVT3 735 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 MYLIPQ8WY64 445 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 TNFRSF25Q93038 417 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 UPF2Q9HAU5 1272 aaKnown RBP18.82■□□□□ 0.6
USHBP1-208ENST00000598309 GABBR1Q9UBS5 961 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 CEP131Q9UPN4 1083 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 GBF1Q92538 1859 aa18.82■□□□□ 0.6
USHBP1-208ENST00000598309 ZBTB42B2RXF5 422 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 MMP1P03956 469 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 MYOGP15173 224 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 FOSL2P15408 326 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 TRIM29Q14134 588 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 RABEP1Q15276 862 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 IER5Q5VY09 327 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 CKAP2LQ8IYA6 745 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 NME8Q8N427 588 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 FAM20AQ96MK3 541 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 IFIH1Q9BYX4 1025 aaKnown RBP18.81■□□□□ 0.6
USHBP1-208ENST00000598309 FAM49AQ9H0Q0 323 aaPredicted RBP18.81■□□□□ 0.6
USHBP1-208ENST00000598309 UNC45AQ9H3U1 944 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 KCNMB3Q9NPA1 279 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 CDY2AQ9Y6F7 541 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 SQORQ9Y6N5 450 aa18.81■□□□□ 0.6
USHBP1-208ENST00000598309 M0QZ92 97 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 TBX3O15119 743 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 CHMP2AO43633 222 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 SLC37A4O43826 429 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 TLL1O43897 1013 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 GJB5O95377 273 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 AMHP03971 560 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 CA3P07451 260 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 CCDC83Q8IWF9 413 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 ZBTB10Q96DT7 871 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 OSBPL7Q9BZF2 842 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 TRPV2Q9Y5S1 764 aa18.8■□□□□ 0.6
USHBP1-208ENST00000598309 KDM3AQ9Y4C1 1321 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 C22orf31O95567 290 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 OATP04181 439 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 GHRP10912 638 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 KLRC1P26715 233 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 HMGN5P82970 282 aaKnown RBP18.79■□□□□ 0.6
USHBP1-208ENST00000598309 NR5A1Q13285 461 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 LPIN1Q14693 890 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 FBXO47Q5MNV8 452 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 KRT40Q6A162 431 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 TSHZ1Q6ZSZ6 1077 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 MIER3Q7Z3K6 550 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 USP38Q8NB14 1042 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 GJA10Q969M2 543 aa18.79■□□□□ 0.6
USHBP1-208ENST00000598309 PTPRSQ13332 1948 aa18.78■□□□□ 0.6
USHBP1-208ENST00000598309 MICAL3Q7RTP6 2002 aa18.78■□□□□ 0.6
USHBP1-208ENST00000598309 CCNT1O60563 726 aaKnown RBP18.78■□□□□ 0.6
USHBP1-208ENST00000598309 PRKCEQ02156 737 aa18.78■□□□□ 0.6
USHBP1-208ENST00000598309 EARS2Q5JPH6 523 aaKnown RBP18.78■□□□□ 0.6
USHBP1-208ENST00000598309 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.78■□□□□ 0.6
USHBP1-208ENST00000598309 FAM43BQ6ZT52 329 aaPredicted RBP18.78■□□□□ 0.6
USHBP1-208ENST00000598309 DIS3L2Q8IYB7 885 aaKnown RBP18.78■□□□□ 0.6
USHBP1-208ENST00000598309 GAS2L1Q99501 681 aaPredicted RBP18.78■□□□□ 0.6
USHBP1-208ENST00000598309 RAD9AQ99638 391 aa18.78■□□□□ 0.6
USHBP1-208ENST00000598309 ZBED2Q9BTP6 218 aa18.78■□□□□ 0.6
USHBP1-208ENST00000598309 PRDM12Q9H4Q4 367 aa18.78■□□□□ 0.6
USHBP1-208ENST00000598309 SIP14410 1827 aa18.77■□□□□ 0.6
USHBP1-208ENST00000598309 MAGEB2O15479 319 aa18.77■□□□□ 0.6
USHBP1-208ENST00000598309 ST18O60284 1047 aa18.77■□□□□ 0.6
USHBP1-208ENST00000598309 ZNF862O60290 1169 aa18.77■□□□□ 0.6
USHBP1-208ENST00000598309 TAP1Q03518 808 aa18.77■□□□□ 0.6
USHBP1-208ENST00000598309 PPP2R5CQ13362 524 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms