RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MARCH8Q5T0T0 291 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 B4GALNT3Q6L9W6 998 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 THNSL1Q8IYQ7 743 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 EXOC6Q8TAG9 804 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 FTHL17Q9BXU8 183 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 TMEM260Q9NX78 707 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 MAP3K20Q9NYL2 800 aaKnown RBP17.9■□□□□ 0.46
LIG1-214ENST00000597146 PCDHB12Q9Y5F1 795 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 OTOGLQ3ZCN5 2332 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 CACNA1GO43497 2377 aa17.89■□□□□ 0.45
LIG1-214ENST00000597146 MBLAC1A4D2B0 266 aaPredicted RBP17.89■□□□□ 0.45
LIG1-214ENST00000597146 PCP11498 1178 aaKnown RBP17.89■□□□□ 0.45
LIG1-214ENST00000597146 TCF7P36402 384 aaPredicted RBP17.89■□□□□ 0.45
LIG1-214ENST00000597146 ENAHQ8N8S7 591 aaPredicted RBP17.89■□□□□ 0.45
LIG1-214ENST00000597146 FLCNQ8NFG4 579 aa17.89■□□□□ 0.45
LIG1-214ENST00000597146 CNTNAP3BQ96NU0 1288 aa17.89■□□□□ 0.45
LIG1-214ENST00000597146 CNTNAP3Q9BZ76 1288 aa17.89■□□□□ 0.45
LIG1-214ENST00000597146 TMX1Q9H3N1 280 aa17.89■□□□□ 0.45
LIG1-214ENST00000597146 LRFN2Q9ULH4 789 aa17.89■□□□□ 0.45
LIG1-214ENST00000597146 PADI3Q9ULW8 664 aa17.89■□□□□ 0.45
LIG1-214ENST00000597146 TBKBP1A7MCY6 615 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 HIDE1A8MVS5 230 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 GCOM1H8Y6P7 765 aaPredicted RBP17.88■□□□□ 0.45
LIG1-214ENST00000597146 ZBTB5O15062 677 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 FIBPO43427 364 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 PI15O43692 258 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 WEE2P0C1S8 567 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 POLR2MP0CAP2 368 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 CLCN5P51795 746 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 IGBP1P78318 339 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 PAK2Q13177 524 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 ANGPT1Q15389 498 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 HOMER1Q86YM7 354 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 KIAA2013Q8IYS2 634 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 COLGALT1Q8NBJ5 622 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 MTMR8Q96EF0 704 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 RNF41Q9H4P4 317 aaPredicted RBP17.88■□□□□ 0.45
LIG1-214ENST00000597146 FRMPD4Q14CM0 1322 aa17.88■□□□□ 0.45
LIG1-214ENST00000597146 MAP1BP46821 2468 aaKnown RBP17.87■□□□□ 0.45
LIG1-214ENST00000597146 TMEM266Q2M3C6 531 aa17.87■□□□□ 0.45
LIG1-214ENST00000597146 MCMDC2Q4G0Z9 681 aa17.87■□□□□ 0.45
LIG1-214ENST00000597146 IQCA1Q86XH1 822 aa17.87■□□□□ 0.45
LIG1-214ENST00000597146 RASGRP4Q8TDF6 673 aa17.87■□□□□ 0.45
LIG1-214ENST00000597146 ZSCAN10Q96SZ4 725 aaPredicted RBP17.87■□□□□ 0.45
LIG1-214ENST00000597146 TCF25Q9BQ70 676 aa17.87■□□□□ 0.45
LIG1-214ENST00000597146 ENTPD7Q9NQZ7 604 aa17.87■□□□□ 0.45
LIG1-214ENST00000597146 AAASQ9NRG9 546 aa17.87■□□□□ 0.45
LIG1-214ENST00000597146 TRPV2Q9Y5S1 764 aa17.87■□□□□ 0.45
LIG1-214ENST00000597146 FANCMQ8IYD8 2048 aa17.86■□□□□ 0.45
LIG1-214ENST00000597146 B4E1Z4 1266 aa17.86■□□□□ 0.45
LIG1-214ENST00000597146 MGEA5O60502 916 aa17.86■□□□□ 0.45
LIG1-214ENST00000597146 SLC35G1Q2M3R5 365 aa17.86■□□□□ 0.45
LIG1-214ENST00000597146 FAM102BQ5T8I3 360 aa17.86■□□□□ 0.45
LIG1-214ENST00000597146 CCDC105Q8IYK2 499 aa17.86■□□□□ 0.45
LIG1-214ENST00000597146 KCNG4Q8TDN1 519 aa17.86■□□□□ 0.45
LIG1-214ENST00000597146 SALL3Q9BXA9 1300 aa17.86■□□□□ 0.45
LIG1-214ENST00000597146 IGSF9BQ9UPX0 1349 aa17.86■□□□□ 0.45
LIG1-214ENST00000597146 KLRF2D3W0D1 207 aa17.85■□□□□ 0.45
LIG1-214ENST00000597146 HOXB8P17481 243 aaPredicted RBP17.85■□□□□ 0.45
LIG1-214ENST00000597146 AOC1P19801 751 aa17.85■□□□□ 0.45
LIG1-214ENST00000597146 SARSP49591 514 aaKnown RBP17.85■□□□□ 0.45
LIG1-214ENST00000597146 NMIQ13287 307 aaPredicted RBP17.85■□□□□ 0.45
LIG1-214ENST00000597146 IER5Q5VY09 327 aa17.85■□□□□ 0.45
LIG1-214ENST00000597146 PDE12Q6L8Q7 609 aaKnown RBP17.85■□□□□ 0.45
LIG1-214ENST00000597146 SAMD3Q8N6K7 520 aa17.85■□□□□ 0.45
LIG1-214ENST00000597146 EVI5LQ96CN4 794 aa17.85■□□□□ 0.45
LIG1-214ENST00000597146 LNPKQ9C0E8 428 aa17.85■□□□□ 0.45
LIG1-214ENST00000597146 TYW1Q9NV66 732 aaKnown RBP17.85■□□□□ 0.45
LIG1-214ENST00000597146 LIMD1Q9UGP4 676 aa17.85■□□□□ 0.45
LIG1-214ENST00000597146 PCDHB7Q9Y5E2 793 aa17.85■□□□□ 0.45
LIG1-214ENST00000597146 CHD6Q8TD26 2715 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 STAM2O75886 525 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 NPR3P17342 541 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 CCDC178Q5BJE1 867 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 TDRD5Q8NAT2 981 aaKnown RBP17.84■□□□□ 0.45
LIG1-214ENST00000597146 MRPS27Q92552 414 aaKnown RBP17.84■□□□□ 0.45
LIG1-214ENST00000597146 CASP10Q92851 521 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 NECTIN4Q96NY8 510 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 PIGSQ96S52 555 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 ADAM7Q9H2U9 754 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 CWH43Q9H720 699 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 ERAP1Q9NZ08 941 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 HCFC2Q9Y5Z7 792 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 SQORQ9Y6N5 450 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 C2orf16Q68DN1 1984 aa17.84■□□□□ 0.45
LIG1-214ENST00000597146 EVPLQ92817 2033 aa17.83■□□□□ 0.45
LIG1-214ENST00000597146 CHD8Q9HCK8 2581 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 GSTTP1A0A1W2PQM5 241 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 M0QZ92 97 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 LMNAP02545 664 aaKnown RBP17.83■□□□□ 0.44
LIG1-214ENST00000597146 PBX3P40426 434 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 IRX6P78412 446 aaPredicted RBP17.83■□□□□ 0.44
LIG1-214ENST00000597146 PUM1Q14671 1186 aaKnown RBP eCLIP17.83■□□□□ 0.44
LIG1-214ENST00000597146 TPRNQ4KMQ1 711 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 CES5AQ6NT32 575 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 DTWD2Q8NBA8 298 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 FEZF2Q8TBJ5 459 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 TRAPPC12Q8WVT3 735 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 GLG1Q92896 1179 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 SENP7Q9BQF6 1050 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms