RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SP7Q8TDD2 431 aaPredicted RBP14.82□□□□□ -0.04
LIG1-212ENST00000596549 FAM49AQ9H0Q0 323 aaPredicted RBP14.82□□□□□ -0.04
LIG1-212ENST00000596549 PCDHA4Q9UN74 947 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 STK36Q9NRP7 1315 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 PRRC2BQ5JSZ5 2229 aaKnown RBP14.81□□□□□ -0.04
LIG1-212ENST00000596549 A0A0C4DFX4 3053 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 POTEB3A0JP26 581 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 RRN3P2A6NIE6 340 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 ZBTB42B2RXF5 422 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 CTDNEP1O95476 244 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 TDP2O95551 362 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 AMHP03971 560 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 SLC26A2P50443 739 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 AK2P54819 239 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 MRPS6P82932 125 aaKnown RBP14.81□□□□□ -0.04
LIG1-212ENST00000596549 GRB10Q13322 594 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 CCDC85BQ15834 202 aaPredicted RBP14.81□□□□□ -0.04
LIG1-212ENST00000596549 ZNF746Q6NUN9 644 aaPredicted RBP14.81□□□□□ -0.04
LIG1-212ENST00000596549 POTEBQ6S5H4 581 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 TBCKQ8TEA7 893 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 ATP8B4Q8TF62 1192 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 GDPD5Q8WTR4 605 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 LINC01599Q8WXQ3 324 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 APBB2Q92870 758 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 RAD9AQ99638 391 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 ZBED2Q9BTP6 218 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 ZNF302Q9NR11 478 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 GJB4Q9NTQ9 266 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 MTCH2Q9Y6C9 303 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 COL1A2P08123 1366 aa14.81□□□□□ -0.04
LIG1-212ENST00000596549 PLXNA4Q9HCM2 1894 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 XIRP2A4UGR9 3374 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 BACH1O14867 736 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 MSH4O15457 936 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 PFKFB2O60825 505 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 SEC24BO95487 1268 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 POU3F3P20264 500 aaPredicted RBP14.8□□□□□ -0.04
LIG1-212ENST00000596549 KRT76Q01546 638 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 TMEM62Q0P6H9 643 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 FAM160B1Q5W0V3 765 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 MIS18BP1Q6P0N0 1132 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 MTHFD1LQ6UB35 978 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 TSHZ1Q6ZSZ6 1077 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 RSPH3Q86UC2 560 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 BLIDQ8IZY5 108 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 MICALL1Q8N3F8 863 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 GJA10Q969M2 543 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 AGO3Q9H9G7 860 aaKnown RBP14.8□□□□□ -0.04
LIG1-212ENST00000596549 TBC1D22BQ9NU19 505 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 MTUS1Q9ULD2 1270 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 KCNJ14Q9UNX9 436 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 PCDHA2Q9Y5H9 948 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 MAFBQ9Y5Q3 323 aaPredicted RBP14.8□□□□□ -0.04
LIG1-212ENST00000596549 TRPV2Q9Y5S1 764 aa14.8□□□□□ -0.04
LIG1-212ENST00000596549 SMIM35A0A1B0GVV1 85 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 HBP1O60381 514 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 CENPBP07199 599 aaPredicted RBP14.79□□□□□ -0.04
LIG1-212ENST00000596549 ERVK-21P61565 698 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 SWSAP1Q6NVH7 229 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 PDXDC2PQ6P474 469 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 CPLX2Q6PUV4 134 aaKnown RBP14.79□□□□□ -0.04
LIG1-212ENST00000596549 SMAP1Q8IYB5 467 aaPredicted RBP14.79□□□□□ -0.04
LIG1-212ENST00000596549 SLC5A5Q92911 643 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 TOP1MTQ969P6 601 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 C17orf80Q9BSJ5 609 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 PHF20Q9BVI0 1012 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 SLKQ9H2G2 1235 aaPredicted RBP14.79□□□□□ -0.04
LIG1-212ENST00000596549 RC3H2Q9HBD1 1191 aaKnown RBP14.79□□□□□ -0.04
LIG1-212ENST00000596549 THEGQ9P2T0 379 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 INSL6Q9Y581 213 aa14.79□□□□□ -0.04
LIG1-212ENST00000596549 KDM3AQ9Y4C1 1321 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 ZNF862O60290 1169 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 C22orf31O95567 290 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 CD52P31358 61 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 USP11P51784 963 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 ST3GAL1Q11201 340 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 UGCGQ16739 394 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 FAM177A1Q8N128 213 aaPredicted RBP14.78□□□□□ -0.04
LIG1-212ENST00000596549 MBOAT7Q96N66 472 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 TGS1Q96RS0 853 aaKnown RBP14.78□□□□□ -0.04
LIG1-212ENST00000596549 UNC45AQ9H3U1 944 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 SUGCTQ9HAC7 445 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 GABBR1Q9UBS5 961 aa14.78□□□□□ -0.04
LIG1-212ENST00000596549 TCF20Q9UGU0 1960 aaKnown RBP14.78□□□□□ -0.04
LIG1-212ENST00000596549 WDR64B1ANS9 1081 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 CHMP2AO43633 222 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 SLC37A4O43826 429 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 PSMD10O75832 226 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 UPP2O95045 317 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 RPLP2P05387 115 aaKnown RBP14.77□□□□□ -0.05
LIG1-212ENST00000596549 PSAPP07602 524 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 LINC00271P0C7V0 271 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 KLRC1P26715 233 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 ME3Q16798 604 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 Q4G0T1 1027 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 B3GNT9Q6UX72 402 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 ETNPPLQ8TBG4 499 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 TMEM40Q8WWA1 233 aa14.77□□□□□ -0.05
LIG1-212ENST00000596549 BBXQ8WY36 941 aaPredicted RBP14.77□□□□□ -0.05
LIG1-212ENST00000596549 TNPO1Q92973 898 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms