RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 MBLAC1A4D2B0 266 aaPredicted RBP18.17■□□□□ 0.5
USHBP1-206ENST00000596436 SMCO2A6NFE2 343 aa18.17■□□□□ 0.5
USHBP1-206ENST00000596436 UPP2O95045 317 aa18.17■□□□□ 0.5
USHBP1-206ENST00000596436 RB1P06400 928 aa18.17■□□□□ 0.5
USHBP1-206ENST00000596436 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
USHBP1-206ENST00000596436 SSRP1Q08945 709 aaKnown RBP18.17■□□□□ 0.5
USHBP1-206ENST00000596436 CTC1Q2NKJ3 1217 aa18.17■□□□□ 0.5
USHBP1-206ENST00000596436 CLP1Q92989 425 aaKnown RBP18.17■□□□□ 0.5
USHBP1-206ENST00000596436 TMEM260Q9NX78 707 aa18.17■□□□□ 0.5
USHBP1-206ENST00000596436 KAT6AQ92794 2004 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 MUC6Q6W4X9 2439 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 GSTTP1A0A1W2PQM5 241 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 POTEB3A0JP26 581 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 C19orf67A6NJJ6 358 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 H3BQ06 376 aaPredicted RBP18.16■□□□□ 0.5
USHBP1-206ENST00000596436 ATP9AO75110 1047 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 TCF7P36402 384 aaPredicted RBP18.16■□□□□ 0.5
USHBP1-206ENST00000596436 LTBRP36941 435 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 LPIN1Q14693 890 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 UTP14CQ5TAP6 766 aaKnown RBP18.16■□□□□ 0.5
USHBP1-206ENST00000596436 POTEBQ6S5H4 581 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 RUFY4Q6ZNE9 571 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 NLRX1Q86UT6 975 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 TRIM22Q8IYM9 498 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 ZNF689Q96CS4 500 aaPredicted RBP18.16■□□□□ 0.5
USHBP1-206ENST00000596436 PGBD1Q96JS3 809 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 LMAN2LQ9H0V9 348 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 VPS54Q9P1Q0 977 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 PRKAG3Q9UGI9 489 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 TTC3P53804 2025 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 ADGRA3Q8IWK6 1321 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 WDFY4Q6ZS81 3184 aa18.16■□□□□ 0.5
USHBP1-206ENST00000596436 ESYT2A0FGR8 921 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 ALADP13716 330 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 ITGB5P18084 799 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 CLK2P49760 499 aaKnown RBP18.15■□□□□ 0.5
USHBP1-206ENST00000596436 ZP2Q05996 745 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 RABEP1Q15276 862 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 MARCH8Q5T0T0 291 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 CPLX2Q6PUV4 134 aaKnown RBP18.15■□□□□ 0.5
USHBP1-206ENST00000596436 CRIPAKQ8N1N5 446 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 FIBCD1Q8N539 461 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 CDHR1Q96JP9 859 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 ZMYND12Q9H0C1 365 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 PCDHA6Q9UN73 950 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 PCDHA8Q9Y5H6 950 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 UBIAD1Q9Y5Z9 338 aa18.15■□□□□ 0.5
USHBP1-206ENST00000596436 NCK2O43639 380 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 DEXIO95424 95 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 GHRP10912 638 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 BMPR1AP36894 532 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 FBXO47Q5MNV8 452 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 SEPT1Q8WYJ6 367 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 C11orf84Q9BUA3 381 aaPredicted RBP18.14■□□□□ 0.49
USHBP1-206ENST00000596436 ERAP1Q9NZ08 941 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 LIMCH1Q9UPQ0 1083 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 RWDD3Q9Y3V2 267 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 STK36Q9NRP7 1315 aa18.14■□□□□ 0.49
USHBP1-206ENST00000596436 SPDYE3A6NKU9 549 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 ENPP3O14638 875 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 GRM6O15303 877 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 CDKL5O76039 1030 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 SSTR3P32745 418 aaPredicted RBP18.13■□□□□ 0.49
USHBP1-206ENST00000596436 CTNNB1P35222 781 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 SP4Q02446 784 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 PPFIA1Q13136 1202 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 GRIK4Q16099 956 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 NSUN7Q8NE18 718 aaKnown RBP18.13■□□□□ 0.49
USHBP1-206ENST00000596436 ANO3Q9BYT9 981 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 TUBE1Q9UJT0 475 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 FAM50BQ9Y247 325 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 KIAA1671Q9BY89 1806 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 MYO7AQ13402 2215 aa18.13■□□□□ 0.49
USHBP1-206ENST00000596436 MAFGO15525 162 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 JAK2O60674 1132 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 DGKIO75912 1065 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
USHBP1-206ENST00000596436 RPLP2P05387 115 aaKnown RBP18.12■□□□□ 0.49
USHBP1-206ENST00000596436 FDPSP14324 419 aaKnown RBP18.12■□□□□ 0.49
USHBP1-206ENST00000596436 HYAL1Q12794 435 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 JAKMIP3Q5VZ66 844 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 TSHZ1Q6ZSZ6 1077 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 RSPH3Q86UC2 560 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 TEX2Q8IWB9 1127 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 ADHFE1Q8IWW8 467 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 CCDC148Q8NFR7 591 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 RASGRP4Q8TDF6 673 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 CCDC12Q8WUD4 166 aaPredicted RBP18.12■□□□□ 0.49
USHBP1-206ENST00000596436 LINC01599Q8WXQ3 324 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 C6orf50Q9HD87 102 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 SH3GLB2Q9NR46 395 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 SQORQ9Y6N5 450 aa18.12■□□□□ 0.49
USHBP1-206ENST00000596436 DCXO43602 365 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 MMP1P03956 469 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 AP3B2Q13367 1082 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 MTMR1Q13613 665 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 CAMK1Q14012 370 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 NPY5RQ15761 445 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 SMAD2Q15796 467 aaKnown RBP18.11■□□□□ 0.49
USHBP1-206ENST00000596436 CCDC83Q8IWF9 413 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms