RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 COL1A2P08123 1366 aa20.55■□□□□ 0.88
ZNF558-204ENST00000596172 EML1O00423 815 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 ZNF862O60290 1169 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 ATP2B1P20020 1258 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 MCM7P33993 719 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 THPOP40225 353 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 SPIRE1Q08AE8 756 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 TTC38Q5R3I4 469 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 C9orf50Q5SZB4 431 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 ZNF618Q5T7W0 954 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 CKAP2LQ8IYA6 745 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 NRBP2Q9NSY0 501 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 PCDHA2Q9Y5H9 948 aa20.54■□□□□ 0.88
ZNF558-204ENST00000596172 TRIOBPQ9H2D6 2365 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 ZBTB42B2RXF5 422 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 TOB1P50616 345 aaPredicted RBP20.53■□□□□ 0.88
ZNF558-204ENST00000596172 GPNMBQ14956 572 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 EPHA7Q15375 998 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 FAM26DQ5JW98 314 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 RASIP1Q5U651 963 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 MCTP1Q6DN14 999 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 ZNF365Q70YC5 407 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.53■□□□□ 0.88
ZNF558-204ENST00000596172 TMEM60Q9H2L4 133 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 TTC12Q9H892 705 aaPredicted RBP20.53■□□□□ 0.88
ZNF558-204ENST00000596172 CEP131Q9UPN4 1083 aa20.53■□□□□ 0.88
ZNF558-204ENST00000596172 RSPH10B2B2RC85 870 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 DKC1O60832 514 aaKnown RBP eCLIP20.52■□□□□ 0.88
ZNF558-204ENST00000596172 FGBP02675 491 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 CXCL10P02778 98 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 OATP04181 439 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 P4HBP07237 508 aaKnown RBP20.52■□□□□ 0.88
ZNF558-204ENST00000596172 RSPH10BP0C881 870 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 ACRP10323 421 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 PSMC5P62195 406 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 IGBP1P78318 339 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 ZNF174Q15697 407 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 UGCGQ16739 394 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 RILPL1Q5EBL4 403 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 XKR3Q5GH77 459 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 MTHFD1LQ6UB35 978 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 RUFY4Q6ZNE9 571 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 RSPH3Q86UC2 560 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 HSCBQ8IWL3 235 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 HERVK_113Q902F9 699 aa20.52■□□□□ 0.88
ZNF558-204ENST00000596172 NIFKQ9BYG3 293 aaKnown RBP20.52■□□□□ 0.88
ZNF558-204ENST00000596172 SMIM35A0A1B0GVV1 85 aa20.51■□□□□ 0.87
ZNF558-204ENST00000596172 STBD1O95210 358 aa20.51■□□□□ 0.87
ZNF558-204ENST00000596172 KLRC1P26715 233 aa20.51■□□□□ 0.87
ZNF558-204ENST00000596172 TXKP42681 527 aa20.51■□□□□ 0.87
ZNF558-204ENST00000596172 QARSP47897 775 aaKnown RBP20.51■□□□□ 0.87
ZNF558-204ENST00000596172 PRKCEQ02156 737 aa20.51■□□□□ 0.87
ZNF558-204ENST00000596172 NME8Q8N427 588 aa20.51■□□□□ 0.87
ZNF558-204ENST00000596172 C4orf32Q8N8J7 132 aa20.51■□□□□ 0.87
ZNF558-204ENST00000596172 TRAPPC12Q8WVT3 735 aa20.51■□□□□ 0.87
ZNF558-204ENST00000596172 MAGEB2O15479 319 aa20.5■□□□□ 0.87
ZNF558-204ENST00000596172 NBNO60934 754 aa20.5■□□□□ 0.87
ZNF558-204ENST00000596172 OR52Z1P0C646 297 aa20.5■□□□□ 0.87
ZNF558-204ENST00000596172 RNPC3Q96LT9 517 aaKnown RBP20.5■□□□□ 0.87
ZNF558-204ENST00000596172 LAD1O00515 517 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 C22orf31O95567 290 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 SYT1P21579 422 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 MBTPS1Q14703 1052 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 TARBP2Q15633 366 aaKnown RBP20.49■□□□□ 0.87
ZNF558-204ENST00000596172 NCAPH2Q6IBW4 605 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 BRAPQ7Z569 592 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 DEFB128Q7Z7B8 93 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 C4orf19Q8IY42 314 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 NEK9Q8TD19 979 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 DNAJB3Q8WWF6 145 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 HSD17B14Q9BPX1 270 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 MTIF3Q9H2K0 278 aaKnown RBP20.49■□□□□ 0.87
ZNF558-204ENST00000596172 PCDHB6Q9Y5E3 794 aa20.49■□□□□ 0.87
ZNF558-204ENST00000596172 LAMA3Q16787 3333 aa20.48■□□□□ 0.87
ZNF558-204ENST00000596172 TRIP12Q14669 1992 aaPredicted RBP20.48■□□□□ 0.87
ZNF558-204ENST00000596172 ACTN1P12814 892 aa20.48■□□□□ 0.87
ZNF558-204ENST00000596172 FXR1P51114 621 aaKnown RBP eCLIP20.48■□□□□ 0.87
ZNF558-204ENST00000596172 IER5Q5VY09 327 aa20.48■□□□□ 0.87
ZNF558-204ENST00000596172 BANK1Q8NDB2 785 aa20.48■□□□□ 0.87
ZNF558-204ENST00000596172 ZBTB10Q96DT7 871 aa20.48■□□□□ 0.87
ZNF558-204ENST00000596172 FTOQ9C0B1 505 aaKnown RBP eCLIP20.48■□□□□ 0.87
ZNF558-204ENST00000596172 ZSWIM4Q9H7M6 989 aa20.48■□□□□ 0.87
ZNF558-204ENST00000596172 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.48■□□□□ 0.87
ZNF558-204ENST00000596172 SLITRK3O94933 977 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 LYPLA2O95372 231 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 CHRNA1P02708 482 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 MGAT3Q09327 533 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 PTGDRQ13258 359 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 NBR1Q14596 966 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 OTOP2Q7RTS6 562 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 KIAA0319LQ8IZA0 1049 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 CEP89Q96ST8 783 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 EIF2AK1Q9BQI3 630 aaKnown RBP20.47■□□□□ 0.87
ZNF558-204ENST00000596172 PPME1Q9Y570 386 aa20.47■□□□□ 0.87
ZNF558-204ENST00000596172 DDX11L8A8MPP1 907 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 BAIAP3O94812 1187 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 CTSHP09668 335 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 PDIA4P13667 645 aaKnown RBP20.46■□□□□ 0.87
ZNF558-204ENST00000596172 PRPHP41219 470 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 FXR2P51116 673 aaKnown RBP eCLIP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms