RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 OXER1Q8TDS5 423 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 DNAJB3Q8WWF6 145 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 TNFRSF25Q93038 417 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 UIMC1Q96RL1 719 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 NKX2-4Q9H2Z4 354 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 SLC28A3Q9HAS3 691 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 TRPC6Q9Y210 931 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 TRANK1O15050 2925 aa14.77□□□□□ -0.05
USE1-207ENST00000596136 SIP14410 1827 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 EYSQ5T1H1 3165 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 IGSF9BQ9UPX0 1349 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 SMIM35A0A1B0GVV1 85 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 WDR64B1ANS9 1081 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 ZBTB42B2RXF5 422 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 CTSHP09668 335 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 MYOGP15173 224 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 SFNP31947 248 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 IGBP1P78318 339 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 DEFB103AP81534 67 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 INF2Q27J81 1249 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 ZNF484Q5JVG2 852 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 MTHFD1LQ6UB35 978 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 NME8Q8N427 588 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 IL27Q8NEV9 243 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 RDM1Q8NG50 284 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 BBXQ8WY36 941 aaPredicted RBP14.76□□□□□ -0.05
USE1-207ENST00000596136 MYLIPQ8WY64 445 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 SEPT8Q92599 483 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 APBB2Q92870 758 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 ZSCAN31Q96LW9 406 aaPredicted RBP14.76□□□□□ -0.05
USE1-207ENST00000596136 DISC1Q9NRI5 854 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 SQORQ9Y6N5 450 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 A0A0C4DFX4 3053 aa14.76□□□□□ -0.05
USE1-207ENST00000596136 PRUNE2Q8WUY3 3088 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 EVPLQ92817 2033 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 CCDC194A0A1B0GVG4 234 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 KIF28PB7ZC32 967 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 JAK2O60674 1132 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 GAS7O60861 476 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 GJB5O95377 273 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 GCFC2P16383 781 aaKnown RBP14.75□□□□□ -0.05
USE1-207ENST00000596136 KLRC1P26715 233 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 JAK3P52333 1124 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 LRCH2Q5VUJ6 765 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 NEK8Q86SG6 692 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 TRAPPC12Q8WVT3 735 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 ZBTB10Q96DT7 871 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 LLPHQ9BRT6 129 aaKnown RBP14.75□□□□□ -0.05
USE1-207ENST00000596136 TEKT3Q9BXF9 490 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 UNC45AQ9H3U1 944 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 KCNMB3Q9NPA1 279 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 GABBR1Q9UBS5 961 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 DDX25Q9UHL0 483 aaKnown RBP14.75□□□□□ -0.05
USE1-207ENST00000596136 TCEAL9Q9UHQ7 104 aa14.75□□□□□ -0.05
USE1-207ENST00000596136 KDM3AQ9Y4C1 1321 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 TBX3O15119 743 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 SLC37A4O43826 429 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 ZNF862O60290 1169 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 MMP1P03956 469 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 CA3P07451 260 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 KRT2P35908 639 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 MRPS6P82932 125 aaKnown RBP14.74□□□□□ -0.05
USE1-207ENST00000596136 LPIN1Q14693 890 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 LETM2Q2VYF4 491 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 EARS2Q5JPH6 523 aaKnown RBP14.74□□□□□ -0.05
USE1-207ENST00000596136 FBXO47Q5MNV8 452 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 IER5Q5VY09 327 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.74□□□□□ -0.05
USE1-207ENST00000596136 FAM43BQ6ZT52 329 aaPredicted RBP14.74□□□□□ -0.05
USE1-207ENST00000596136 PIK3AP1Q6ZUJ8 805 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 GJA10Q969M2 543 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 FAM167AQ96KS9 214 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 FAM20AQ96MK3 541 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 RAD9AQ99638 391 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 NAP1L4Q99733 375 aaKnown RBP14.74□□□□□ -0.05
USE1-207ENST00000596136 IFIH1Q9BYX4 1025 aaKnown RBP14.74□□□□□ -0.05
USE1-207ENST00000596136 SH2B1Q9NRF2 756 aaPredicted RBP14.74□□□□□ -0.05
USE1-207ENST00000596136 CDY2AQ9Y6F7 541 aa14.74□□□□□ -0.05
USE1-207ENST00000596136 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.73□□□□□ -0.05
USE1-207ENST00000596136 RBAK-RBAKDNI3L0D1 243 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 TLL1O43897 1013 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 FOSL2P15408 326 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 TAP1Q03518 808 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 NR5A1Q13285 461 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 PPP2R2DQ66LE6 453 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 KRT40Q6A162 431 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 KIAA0319LQ8IZA0 1049 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 USP38Q8NB14 1042 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 TOP1MTQ969P6 601 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 FAM49AQ9H0Q0 323 aaPredicted RBP14.73□□□□□ -0.05
USE1-207ENST00000596136 SAMM50Q9Y512 469 aa14.73□□□□□ -0.05
USE1-207ENST00000596136 LOXHD1Q8IVV2 1947 aa14.72□□□□□ -0.05
USE1-207ENST00000596136 TTC3P53804 2025 aa14.72□□□□□ -0.05
USE1-207ENST00000596136 BTBD18B2RXH4 712 aa14.72□□□□□ -0.05
USE1-207ENST00000596136 ARHGEF15O94989 841 aa14.72□□□□□ -0.05
USE1-207ENST00000596136 STBD1O95210 358 aa14.72□□□□□ -0.05
USE1-207ENST00000596136 C22orf31O95567 290 aa14.72□□□□□ -0.05
USE1-207ENST00000596136 AMHP03971 560 aa14.72□□□□□ -0.05
USE1-207ENST00000596136 GHRP10912 638 aa14.72□□□□□ -0.05
USE1-207ENST00000596136 HTRA4P83105 476 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms