RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 KATNBL1Q9H079 304 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.11■■□□□ 1.29
PNKP-203ENST00000593946 SLC5A4Q9NY91 659 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 RWDD2AQ9UIY3 292 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 MAPK8IP1Q9UQF2 711 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 IGSF9BQ9UPX0 1349 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 ARHGEF35A5YM69 484 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 ZNF862O60290 1169 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 DKC1O60832 514 aaKnown RBP eCLIP23.11■■□□□ 1.29
PNKP-203ENST00000593946 AOC2O75106 756 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 PPP1R2P41236 205 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 PLCB2Q00722 1185 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 MAP2K5Q13163 448 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 SWSAP1Q6NVH7 229 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 SLC39A2Q9NP94 309 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 PDGFCQ9NRA1 345 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 ANKEF1Q9NU02 776 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 NFE2L3Q9Y4A8 694 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 IGKV6D-21A0A0A0MT36 114 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 ADCY5O95622 1261 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 SNAI1O95863 264 aaPredicted RBP23.1■■□□□ 1.29
PNKP-203ENST00000593946 HOXC6P09630 235 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 CCDC173Q0VFZ6 552 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 TTLL4Q14679 1199 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 FAM26FQ5R3K3 315 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 CELF3Q5SZQ8 465 aaKnown RBP23.1■■□□□ 1.29
PNKP-203ENST00000593946 TAPT1Q6NXT6 567 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 REM2Q8IYK8 340 aaPredicted RBP23.1■■□□□ 1.29
PNKP-203ENST00000593946 MSL3Q8N5Y2 521 aaKnown RBP23.1■■□□□ 1.29
PNKP-203ENST00000593946 NELFBQ8WX92 580 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 USP6NLQ92738 828 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 PPP1R9BQ96SB3 815 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 TINF2Q9BSI4 451 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 PCDHA2Q9Y5H9 948 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 ZSWIM8A7E2V4 1837 aa23.1■■□□□ 1.29
PNKP-203ENST00000593946 GSTTP1A0A1W2PQM5 241 aa23.09■■□□□ 1.29
PNKP-203ENST00000593946 RBM47A0AV96 593 aaKnown RBP23.09■■□□□ 1.29
PNKP-203ENST00000593946 PSMA7O14818 248 aa23.09■■□□□ 1.29
PNKP-203ENST00000593946 STBD1O95210 358 aa23.09■■□□□ 1.29
PNKP-203ENST00000593946 STX17P56962 302 aa23.09■■□□□ 1.29
PNKP-203ENST00000593946 SPATA1Q5VX52 437 aa23.09■■□□□ 1.29
PNKP-203ENST00000593946 DHTKD1Q96HY7 919 aaPredicted RBP23.09■■□□□ 1.29
PNKP-203ENST00000593946 MLXIPQ9HAP2 919 aa23.09■■□□□ 1.29
PNKP-203ENST00000593946 FANCLQ9NW38 375 aa23.09■■□□□ 1.29
PNKP-203ENST00000593946 TXNP10599 105 aaKnown RBP23.08■■□□□ 1.29
PNKP-203ENST00000593946 GUCY2CP25092 1073 aa23.08■■□□□ 1.29
PNKP-203ENST00000593946 HERC4Q5GLZ8 1057 aaPredicted RBP23.08■■□□□ 1.29
PNKP-203ENST00000593946 PADI6Q6TGC4 694 aa23.08■■□□□ 1.29
PNKP-203ENST00000593946 ANO5Q75V66 913 aa23.08■■□□□ 1.29
PNKP-203ENST00000593946 MAFBQ9Y5Q3 323 aaPredicted RBP23.08■■□□□ 1.29
PNKP-203ENST00000593946 RSPH10B2B2RC85 870 aa23.08■■□□□ 1.28
PNKP-203ENST00000593946 BACH1O14867 736 aa23.08■■□□□ 1.28
PNKP-203ENST00000593946 RSPH10BP0C881 870 aa23.08■■□□□ 1.28
PNKP-203ENST00000593946 UTP14CQ5TAP6 766 aaKnown RBP23.08■■□□□ 1.28
PNKP-203ENST00000593946 GUF1Q8N442 669 aaKnown RBP23.08■■□□□ 1.28
PNKP-203ENST00000593946 ODF2LQ9ULJ1 636 aa23.08■■□□□ 1.28
PNKP-203ENST00000593946 TMEM150BA6NC51 233 aa23.07■■□□□ 1.28
PNKP-203ENST00000593946 TBCAO75347 108 aaKnown RBP23.07■■□□□ 1.28
PNKP-203ENST00000593946 ECM2O94769 699 aaPredicted RBP23.07■■□□□ 1.28
PNKP-203ENST00000593946 ZNF18P17022 549 aa23.07■■□□□ 1.28
PNKP-203ENST00000593946 ZNF131P52739 623 aa23.07■■□□□ 1.28
PNKP-203ENST00000593946 PRKCEQ02156 737 aa23.07■■□□□ 1.28
PNKP-203ENST00000593946 SOCS4Q8WXH5 440 aa23.07■■□□□ 1.28
PNKP-203ENST00000593946 SEPT1Q8WYJ6 367 aa23.07■■□□□ 1.28
PNKP-203ENST00000593946 ABHD16BQ9H3Z7 469 aa23.07■■□□□ 1.28
PNKP-203ENST00000593946 ZNF302Q9NR11 478 aa23.07■■□□□ 1.28
PNKP-203ENST00000593946 COL4A3BPQ9Y5P4 624 aa23.07■■□□□ 1.28
PNKP-203ENST00000593946 GAP43P17677 238 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 TMEM63BQ5T3F8 832 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 PLA2G4FQ68DD2 849 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 OTUD6AQ7L8S5 288 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 SFR1Q86XK3 245 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 DHX37Q8IY37 1157 aaKnown RBP23.06■■□□□ 1.28
PNKP-203ENST00000593946 GLIS3Q8NEA6 775 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 PCYT2Q99447 389 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 GPR20Q99678 358 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 ZHX3Q9H4I2 956 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 GJD2Q9UKL4 321 aa23.06■■□□□ 1.28
PNKP-203ENST00000593946 TNPO2O14787 897 aaKnown RBP23.05■■□□□ 1.28
PNKP-203ENST00000593946 ATP1A3P13637 1013 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 CCNE1P24864 410 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 CTGFP29279 349 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 PMS1P54277 932 aaKnown RBP23.05■■□□□ 1.28
PNKP-203ENST00000593946 MAPK7Q13164 816 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 HSDL1Q3SXM5 330 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 XKR9Q5GH70 373 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 AFAP1L1Q8TED9 768 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 COPS5Q92905 334 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 CCDC43Q96MW1 224 aaKnown RBP23.05■■□□□ 1.28
PNKP-203ENST00000593946 FGFBP2Q9BYJ0 223 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 TRIM5Q9C035 493 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 OLFML3Q9NRN5 406 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 FAM13AO94988 1023 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 ATP4AP20648 1035 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 TCF7P36402 384 aaPredicted RBP23.05■■□□□ 1.28
PNKP-203ENST00000593946 NPEPPSP55786 919 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 XKR3Q5GH77 459 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 CENPPQ6IPU0 288 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 TTI2Q6NXR4 508 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 P2RX5Q93086 422 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms