RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 TMC7Q7Z402 723 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 SERINC5Q86VE9 423 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 MIGA1Q8NAN2 632 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 COLGALT1Q8NBJ5 622 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 MORC4Q8TE76 937 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 WHAMMQ8TF30 809 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 AUTS2Q8WXX7 1259 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 NANOS1Q8WY41 292 aaKnown RBP3.72□□□□□ -1.81
VRK3-204ENST00000593912 APBB2Q92870 758 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 KIFC2Q96AC6 838 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 CLDN23Q96B33 292 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 SHDQ96IW2 340 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 KLHL5Q96PQ7 755 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 GPR20Q99678 358 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 PNNQ9H307 717 aaKnown RBP3.72□□□□□ -1.81
VRK3-204ENST00000593912 BCAS3Q9H6U6 928 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 ACAD9Q9H845 621 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 SLC2A4RGQ9NR83 387 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 RNF146Q9NTX7 359 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 FAM217BQ9NTX9 383 aaPredicted RBP3.72□□□□□ -1.81
VRK3-204ENST00000593912 LRP2BPQ9P2M1 347 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 NXF1Q9UBU9 619 aaKnown RBP3.72□□□□□ -1.81
VRK3-204ENST00000593912 FBXO40Q9UH90 709 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 CTDP1Q9Y5B0 961 aaPredicted RBP3.72□□□□□ -1.81
VRK3-204ENST00000593912 SUPT16HQ9Y5B9 1047 aaKnown RBP3.72□□□□□ -1.81
VRK3-204ENST00000593912 PCDHB12Q9Y5F1 795 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 NUMBLQ9Y6R0 609 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 EML5Q05BV3 1969 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 ZMYM2Q9UBW7 1377 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 CELSR1Q9NYQ6 3014 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 BOD1L1Q8NFC6 3051 aa3.72□□□□□ -1.81
VRK3-204ENST00000593912 PTPRBP23467 1997 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 LRRK2Q5S007 2527 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 ATG2BQ96BY7 2078 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 LNP1A1A4G5 178 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 FAM221BA6H8Z2 402 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 CAPN9O14815 690 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 ATP2A1O14983 1001 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 TREHO43280 583 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 ZBED4O75132 1171 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 MYBP10242 640 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 TXNP10599 105 aaKnown RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 CYP2D6P10635 497 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 CSRP1P21291 193 aaKnown RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 MPLP40238 635 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 MAGEA9P43362 315 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 ABCG1P45844 678 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 CSRP3P50461 194 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 ALDH5A1P51649 535 aaPredicted RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 SNAP25P60880 206 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 FAM193AP78312 1265 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 HTR4Q13639 388 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 LY6DQ14210 128 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 LETM2Q2VYF4 491 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 SLC44A4Q53GD3 710 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 ZBTB41Q5SVQ8 909 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 PDE12Q6L8Q7 609 aaKnown RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 NSMFQ6X4W1 530 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 MAMSTRQ6ZN01 415 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 TPRG1Q6ZUI0 275 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 GPR149Q86SP6 731 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 RTN4RL1Q86UN2 441 aaPredicted RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 KBTBD6Q86V97 674 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 MARCH9Q86YJ5 346 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 ZNF687Q8N1G0 1237 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 LRRC47Q8N1G4 583 aaKnown RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 SPATA5Q8NB90 893 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 MRPS27Q92552 414 aaKnown RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 TSR2Q969E8 191 aaKnown RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 DYNLL2Q96FJ2 89 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 PRORYQ9H606 182 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 SH2D4AQ9H788 454 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 SLC38A10Q9HBR0 1119 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 DZANK1Q9NVP4 752 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 CYP39A1Q9NYL5 469 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 HSPBP1Q9NZL4 362 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 CEP126Q9P2H0 1117 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 DDX41Q9UJV9 622 aaKnown RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 PRR12Q9ULL5 1215 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 NDRG2Q9UN36 371 aaKnown RBP3.71□□□□□ -1.82
VRK3-204ENST00000593912 DOCK6Q96HP0 2047 aa3.71□□□□□ -1.82
VRK3-204ENST00000593912 CACNA1DQ01668 2161 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 USP9YO00507 2555 aaPredicted RBP3.7□□□□□ -1.82
VRK3-204ENST00000593912 MYH4Q9Y623 1939 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 NUP205Q92621 2012 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 OTOGQ6ZRI0 2925 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 A0A087WV48 116 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 SPDYE4A6NLX3 237 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 TBKBP1A7MCY6 615 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 B8ZZF3 427 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 HAS3O00219 553 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 CDX4O14627 284 aaPredicted RBP3.7□□□□□ -1.82
VRK3-204ENST00000593912 NKRFO15226 690 aaKnown RBP eCLIP3.7□□□□□ -1.82
VRK3-204ENST00000593912 SORBS3O60504 671 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 LILRB3O75022 631 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 F2P00734 622 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 CHRNA1P02708 482 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 POLR3DP05423 398 aaPredicted RBP3.7□□□□□ -1.82
VRK3-204ENST00000593912 ALAS1P13196 640 aa3.7□□□□□ -1.82
VRK3-204ENST00000593912 CD44P16070 742 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms