RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SETD4Q9NVD3 440 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 GSTTP1A0A1W2PQM5 241 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 ESYT2A0FGR8 921 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 RSPH10B2B2RC85 870 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 CAND2O75155 1236 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 RSPH10BP0C881 870 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 THPOP40225 353 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 GPM6BQ13491 265 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 SMAD2Q15796 467 aaKnown RBP15.06■□□□□ 0
H3F3B-213ENST00000593254 NTRK3Q16288 839 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 PKN1Q16512 942 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 CTC1Q2NKJ3 1217 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 CEP55Q53EZ4 464 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 PLEKHG4Q58EX7 1191 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 HERC4Q5GLZ8 1057 aaPredicted RBP15.06■□□□□ 0
H3F3B-213ENST00000593254 RUFY3Q7L099 469 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 LMBR1Q8WVP7 490 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 TOP1MTQ969P6 601 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 PHOX2BQ99453 314 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 UPF3BQ9BZI7 483 aaKnown RBP15.06■□□□□ 0
H3F3B-213ENST00000593254 ZSWIM6Q9HCJ5 1215 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 JPH1Q9HDC5 661 aaPredicted RBP15.06■□□□□ 0
H3F3B-213ENST00000593254 TMEM260Q9NX78 707 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 PKD2L1Q9P0L9 805 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 NRCAMQ92823 1304 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 VPS13AQ96RL7 3174 aa15.06■□□□□ 0
H3F3B-213ENST00000593254 PRPF3O43395 683 aaKnown RBP15.05■□□□□ -0
H3F3B-213ENST00000593254 ERICH6BQ5W0A0 696 aa15.05■□□□□ -0
H3F3B-213ENST00000593254 TMEM192Q8IY95 271 aa15.05■□□□□ -0
H3F3B-213ENST00000593254 CRYGNQ8WXF5 182 aa15.05■□□□□ -0
H3F3B-213ENST00000593254 ZMYND12Q9H0C1 365 aa15.05■□□□□ -0
H3F3B-213ENST00000593254 PPP4R2Q9NY27 417 aa15.05■□□□□ -0
H3F3B-213ENST00000593254 ERAP1Q9NZ08 941 aa15.05■□□□□ -0
H3F3B-213ENST00000593254 SLC9A2Q9UBY0 812 aa15.05■□□□□ -0
H3F3B-213ENST00000593254 NFASCO94856 1347 aa15.05■□□□□ -0
H3F3B-213ENST00000593254 MYH9P35579 1960 aaKnown RBP15.05■□□□□ -0
H3F3B-213ENST00000593254 WDR81Q562E7 1941 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 MEIS1O00470 390 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 NCK2O43639 380 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 ARP10275 920 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 IFNAR1P17181 557 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 PDIA3P30101 505 aaKnown RBP15.04■□□□□ -0
H3F3B-213ENST00000593254 ARHGAP4P98171 946 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 TOB2Q14106 344 aaPredicted RBP15.04■□□□□ -0
H3F3B-213ENST00000593254 NIPA1Q7RTP0 329 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 RPAINQ86UA6 219 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 CCDC12Q8WUD4 166 aaPredicted RBP15.04■□□□□ -0
H3F3B-213ENST00000593254 PHKBQ93100 1093 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 YME1L1Q96TA2 773 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 RNF26Q9BY78 433 aaPredicted RBP15.04■□□□□ -0
H3F3B-213ENST00000593254 TM6SF1Q9BZW5 370 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 SMARCAD1Q9H4L7 1026 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 CLDND1Q9NY35 253 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 MUTYHQ9UIF7 546 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 PTPRZ1P23471 2315 aaPredicted RBP15.04■□□□□ -0
H3F3B-213ENST00000593254 DCHS1Q96JQ0 3298 aa15.04■□□□□ -0
H3F3B-213ENST00000593254 WDR87Q6ZQQ6 2873 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 RIF1Q5UIP0 2472 aaKnown RBP15.03■□□□□ -0
H3F3B-213ENST00000593254 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.03■□□□□ -0
H3F3B-213ENST00000593254 ADAMTS3O15072 1205 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 MARK3P27448 753 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 PPFIA1Q13136 1202 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 ITGB3BPQ13352 177 aaPredicted RBP15.03■□□□□ -0
H3F3B-213ENST00000593254 JAKMIP3Q5VZ66 844 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 MCTP2Q6DN12 878 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 BMP8AQ7Z5Y6 402 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 REXO1Q8N1G1 1221 aaKnown RBP15.03■□□□□ -0
H3F3B-213ENST00000593254 PRSS33Q8NF86 280 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 GLG1Q92896 1179 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 PCYT2Q99447 389 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 POP1Q99575 1024 aaKnown RBP15.03■□□□□ -0
H3F3B-213ENST00000593254 SDF4Q9BRK5 362 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 AGO4Q9HCK5 861 aaKnown RBP15.03■□□□□ -0
H3F3B-213ENST00000593254 C6orf50Q9HD87 102 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 CYP46A1Q9Y6A2 500 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 LOXHD1Q8IVV2 1947 aa15.03■□□□□ -0
H3F3B-213ENST00000593254 IGLV3-22A0A075B6J6 115 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 MBLAC1A4D2B0 266 aaPredicted RBP15.02■□□□□ -0
H3F3B-213ENST00000593254 FAM86B1E9PN63 330 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 C5orf67F2Z3F1 127 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 MBTPS2O43462 519 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 CYP3A4P08684 503 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 CTSHP09668 335 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 FAM86B2P0C5J1 330 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 LINC00271P0C7V0 271 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 GNA11P29992 359 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 ACTR2P61160 394 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 CCT2P78371 535 aaKnown RBP15.02■□□□□ -0
H3F3B-213ENST00000593254 AKAP17AQ02040 695 aaKnown RBP15.02■□□□□ -0
H3F3B-213ENST00000593254 DLX2Q07687 328 aaPredicted RBP15.02■□□□□ -0
H3F3B-213ENST00000593254 GRIK4Q16099 956 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 FAM26DQ5JW98 314 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 TAF2Q6P1X5 1199 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 EP400NLQ6ZTU2 488 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 RNF135Q8IUD6 432 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 SLC26A6Q9BXS9 759 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 OSBPL7Q9BZF2 842 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 NCOA5Q9HCD5 579 aaKnown RBP15.02■□□□□ -0
H3F3B-213ENST00000593254 TUBE1Q9UJT0 475 aa15.02■□□□□ -0
H3F3B-213ENST00000593254 EVPLQ92817 2033 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms