RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 KIF5BP33176 963 aa12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 SMAD4Q13485 552 aaKnown RBP12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 WWC2Q6AWC2 1192 aa12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 XRRA1Q6P2D8 792 aa12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 CASC1Q6TDU7 716 aa12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 MICU3Q86XE3 530 aa12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 LMAN2LQ9H0V9 348 aa12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 JPH1Q9HDC5 661 aaPredicted RBP12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 PRKAG3Q9UGI9 489 aa12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 FNDC1Q4ZHG4 1894 aaPredicted RBP12.84□□□□□ -0.35
PRKCSH-220ENST00000593104 EVPLQ92817 2033 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 SLC27A2O14975 620 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 ACTR2P61160 394 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 NFX1Q12986 1120 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 ITGB3BPQ13352 177 aaPredicted RBP12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 FAM102BQ5T8I3 360 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 IER5LQ5T953 404 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 TMTC3Q6ZXV5 915 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 CMTR2Q8IYT2 770 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 GIMAP8Q8ND71 665 aaPredicted RBP12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 VN1R2Q8NFZ6 395 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 TMEM40Q8WWA1 233 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 MSLNLQ96KJ4 702 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 APOL5Q9BWW9 433 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 LSG1Q9H089 658 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 KCNH7Q9NS40 1196 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 SLC9A2Q9UBY0 812 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 FAM50BQ9Y247 325 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 RWDD3Q9Y3V2 267 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 ZNF318Q5VUA4 2279 aa12.83□□□□□ -0.36
PRKCSH-220ENST00000593104 CCNE2O96020 404 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 SCG2P13521 617 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 SP100P23497 879 aaPredicted RBP12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 PAK2Q13177 524 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 MTHFD1LQ6UB35 978 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 NPAS4Q8IUM7 802 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 PRSS33Q8NF86 280 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 CDHR1Q96JP9 859 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 MAP3K14Q99558 947 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 MXRA8Q9BRK3 442 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 PLVAPQ9BX97 442 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 CDH22Q9UJ99 828 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 NOC2LQ9Y3T9 749 aaKnown RBP12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 CNTNAP5Q8WYK1 1306 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 IGSF9BQ9UPX0 1349 aa12.82□□□□□ -0.36
PRKCSH-220ENST00000593104 TBKBP1A7MCY6 615 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 KLRC1P26715 233 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 SMARCA1P28370 1054 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 MCM5P33992 734 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 STAT5BP51692 787 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 HERC4Q5GLZ8 1057 aaPredicted RBP12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 IER5Q5VY09 327 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 CREB3L3Q68CJ9 461 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 FANCBQ8NB91 859 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 P2RX5Q93086 422 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 ZNF668Q96K58 619 aaPredicted RBP12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 LZTS2Q9BRK4 669 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 ANO3Q9BYT9 981 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 AZI2Q9H6S1 392 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 AGO4Q9HCK5 861 aaKnown RBP12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 USP15Q9Y4E8 981 aaPredicted RBP12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 PCDHA2Q9Y5H9 948 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 SLC12A7Q9Y666 1083 aa12.81□□□□□ -0.36
PRKCSH-220ENST00000593104 RRN3P2A6NIE6 340 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 M0QZ92 97 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 NCK2O43639 380 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 FGFR1P11362 822 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 ATP4AP20648 1035 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 PBX3P40426 434 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 GNAQP50148 359 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 NAPAP54920 295 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 ERVFC1P60507 584 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 KRT76Q01546 638 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 SPOUT1Q5T280 376 aaKnown RBP12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 CCDC60Q8IWA6 550 aaPredicted RBP12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 EFHBQ8N7U6 833 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 SMRP1Q8NCR6 262 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 MICAL1Q8TDZ2 1067 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 TMEM87BQ96K49 555 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 RPGRIP1Q96KN7 1286 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 UPF3BQ9BZI7 483 aaKnown RBP12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 ERVK-5Q9HDB9 667 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 BRPF3Q9ULD4 1205 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 LRFN2Q9ULH4 789 aa12.8□□□□□ -0.36
PRKCSH-220ENST00000593104 KMT2EQ8IZD2 1858 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 TMEM221A6NGB7 291 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 M0R296 226 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 BACH1O14867 736 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 EYA4O95677 639 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 VTNP04004 478 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 STAG3L1P0CL83 205 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 EDAQ92838 391 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 POP1Q99575 1024 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 OSMRQ99650 979 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 ADAM2Q99965 735 aa12.79□□□□□ -0.36
PRKCSH-220ENST00000593104 SDF4Q9BRK5 362 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms