RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 FGFR2P21802 821 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 ATP2B4P23634 1241 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 CCND1P24385 295 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 GYG1P46976 350 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 PMS2P54278 862 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 SLC8A3P57103 927 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 TRMT10CQ7L0Y3 403 aaKnown RBP3.83□□□□□ -1.8
VMP1-216ENST00000592790 SPATA24Q86W54 205 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 ZNF34Q8IZ26 560 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 SRBD1Q8N5C6 995 aaKnown RBP3.83□□□□□ -1.8
VMP1-216ENST00000592790 MAGEC3Q8TD91 643 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 SNRNP27Q8WVK2 155 aaKnown RBP3.83□□□□□ -1.8
VMP1-216ENST00000592790 MAGOHBQ96A72 148 aaKnown RBP3.83□□□□□ -1.8
VMP1-216ENST00000592790 MCUR1Q96AQ8 359 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 CFAP57Q96MR6 1250 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 TTC25Q96NG3 672 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 WNT8AQ9H1J5 351 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 DPH5Q9H2P9 285 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 PLEKHA4Q9H4M7 779 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 TMEM206Q9H813 350 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 TMBIM4Q9HC24 238 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 DCP1AQ9NPI6 582 aaPredicted RBP3.83□□□□□ -1.8
VMP1-216ENST00000592790 GDF3Q9NR23 364 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 FAM217BQ9NTX9 383 aaPredicted RBP3.83□□□□□ -1.8
VMP1-216ENST00000592790 ADAMTS1Q9UHI8 967 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 USH1CQ9Y6N9 552 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 COL24A1Q17RW2 1714 aa3.83□□□□□ -1.8
VMP1-216ENST00000592790 ARHGEF35A5YM69 484 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 SMIM23A6NLE4 172 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 TBX3O15119 743 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 MAPK13O15264 365 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 CDC25AP30304 524 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 MAGOHP61326 146 aaKnown RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 MYL7Q01449 175 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 GFPT1Q06210 699 aaPredicted RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 COASYQ13057 564 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 TXNRD1Q16881 649 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 WDR44Q5JSH3 913 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 TTC19Q6DKK2 380 aaPredicted RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 USP49Q70CQ1 688 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 FAM186BQ8IYM0 893 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 MYCT1Q8N699 235 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 PRPF38AQ8NAV1 312 aaKnown RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 ZNF507Q8TCN5 953 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 MICAL1Q8TDZ2 1067 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 ANKS1AQ92625 1134 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 PAIP2Q9BPZ3 127 aaKnown RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 TRIM31Q9BZY9 425 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 ATP6V0A4Q9HBG4 840 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.82□□□□□ -1.8
VMP1-216ENST00000592790 RBM12Q9NTZ6 932 aaKnown RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 AGPAT5Q9NUQ2 364 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 DONSONQ9NYP3 566 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 GCNT4Q9P109 453 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 ZBTB1Q9Y2K1 713 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 MYH15Q9Y2K3 1946 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 PHRF1Q9P1Y6 1649 aaKnown RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 CCT8L1PA6NM43 557 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 O00370 1275 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 ASAP2O43150 1006 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 TTLL1O95922 423 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 CYP19A1P11511 503 aaPredicted RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 SKIP12755 728 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 IBSPP21815 317 aaPredicted RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 BMP6P22004 513 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 CASP1P29466 404 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 RFC4P35249 363 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 SLC1A4P43007 532 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 MFAP3P55082 362 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 MECOMQ03112 1051 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 KCNH2Q12809 1159 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 C11orf91Q3C1V1 193 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 PACS2Q86VP3 889 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 COL23A1Q86Y22 540 aaPredicted RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 CCDC13Q8IYE1 715 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 RIBC1Q8N443 379 aaPredicted RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 ARMC2Q8NEN0 867 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 TGFBRAP1Q8WUH2 860 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 SAAL1Q96ER3 474 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 SEC16BQ96JE7 1060 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 FAM20AQ96MK3 541 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 XPO6Q96QU8 1125 aaKnown RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 SH3GL2Q99962 352 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 MKNK1Q9BUB5 465 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 WDR11Q9BZH6 1224 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 CARD9Q9H257 536 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 HSD3B7Q9H2F3 369 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 SUDS3Q9H7L9 328 aaPredicted RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 HOMER2Q9NSB8 354 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 GGA1Q9UJY5 639 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 KIAA1024Q9UPX6 916 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 MEGF6O75095 1541 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 TMEM110-MUSTN1A8MSY1 372 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 ZNF185O15231 689 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 FGGP02679 453 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 DSG3P32926 999 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 DYNLL1P63167 89 aaKnown RBP3.82□□□□□ -1.8
VMP1-216ENST00000592790 GUCY1A3Q02108 690 aa3.82□□□□□ -1.8
VMP1-216ENST00000592790 GRIN1Q05586 938 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms