RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
ZNF540-210ENST00000592533 ISCUQ9H1K1 167 aa12.72□□□□□ -0.37
ZNF540-210ENST00000592533 DNAJC18Q9H819 358 aa12.72□□□□□ -0.37
ZNF540-210ENST00000592533 SIX2Q9NPC8 291 aa12.72□□□□□ -0.37
ZNF540-210ENST00000592533 FAM153AQ9UHL3 310 aa12.72□□□□□ -0.37
ZNF540-210ENST00000592533 NAGPAQ9UK23 515 aa12.72□□□□□ -0.37
ZNF540-210ENST00000592533 SREBF1P36956 1147 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 NPEPPSP55786 919 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 GNGT1P63211 74 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 CUL1Q13616 776 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 CFAP58Q5T655 872 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 KRT12Q99456 494 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 REEP2Q9BRK0 252 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.71□□□□□ -0.37
ZNF540-210ENST00000592533 EFCC1Q9HA90 598 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 TYW1Q9NV66 732 aaKnown RBP12.71□□□□□ -0.37
ZNF540-210ENST00000592533 POLRMTO00411 1230 aaKnown RBP12.71□□□□□ -0.37
ZNF540-210ENST00000592533 FOSP01100 380 aaPredicted RBP12.71□□□□□ -0.37
ZNF540-210ENST00000592533 STAT3P40763 770 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
ZNF540-210ENST00000592533 DDR1Q08345 913 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 RPS6KA1Q15418 735 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 LRIG3Q6UXM1 1119 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 CCDC43Q96MW1 224 aaKnown RBP12.71□□□□□ -0.37
ZNF540-210ENST00000592533 P2RX7Q99572 595 aaKnown RBP12.71□□□□□ -0.37
ZNF540-210ENST00000592533 POLR3CQ9BUI4 534 aaPredicted RBP12.71□□□□□ -0.37
ZNF540-210ENST00000592533 MRIQ9BWK5 157 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
ZNF540-210ENST00000592533 DNM3Q9UQ16 869 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 MYH11P35749 1972 aa12.71□□□□□ -0.37
ZNF540-210ENST00000592533 ASTN1O14525 1302 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 A0A087WUV0 522 aaPredicted RBP12.71□□□□□ -0.38
ZNF540-210ENST00000592533 RAD51CO43502 376 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 KRT18P05783 430 aaKnown RBP12.71□□□□□ -0.38
ZNF540-210ENST00000592533 ECHS1P30084 290 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 SLC15A2Q16348 729 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 EXOC3L4Q17RC7 722 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 SFR1Q86XK3 245 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 RASGEF1CQ8N431 466 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.38
ZNF540-210ENST00000592533 TAF4BQ92750 862 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 BORCS6Q96GS4 357 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 PLEKHA4Q9H4M7 779 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 KANSL2Q9H9L4 492 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 OLFML3Q9NRN5 406 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 VAV3Q9UKW4 847 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 STXBP5LQ9Y2K9 1186 aa12.71□□□□□ -0.38
ZNF540-210ENST00000592533 SHTN1A0MZ66 631 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 ZSCAN5CA6NGD5 496 aaPredicted RBP12.7□□□□□ -0.38
ZNF540-210ENST00000592533 EBAG9O00559 213 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
ZNF540-210ENST00000592533 XRCC5P13010 732 aaKnown RBP12.7□□□□□ -0.38
ZNF540-210ENST00000592533 SLC9A1P19634 815 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 GMCL1P1Q8NEA9 526 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 TEKT1Q969V4 418 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 FLOT1O75955 427 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 CYP3A4P08684 503 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 ACTN1P12814 892 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
ZNF540-210ENST00000592533 PSMC6P62333 389 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 SPATS2Q86XZ4 545 aaKnown RBP12.7□□□□□ -0.38
ZNF540-210ENST00000592533 TPCN2Q8NHX9 752 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 BCAS4Q8TDM0 211 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 SLC35C1Q96A29 364 aa12.7□□□□□ -0.38
ZNF540-210ENST00000592533 SUCLA2Q9P2R7 463 aaPredicted RBP12.7□□□□□ -0.38
ZNF540-210ENST00000592533 HMGB1P1B2RPK0 211 aaPredicted RBP12.69□□□□□ -0.38
ZNF540-210ENST00000592533 EIF3DO15371 548 aaKnown RBP eCLIP12.69□□□□□ -0.38
ZNF540-210ENST00000592533 AKAP3O75969 853 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 NR3C1P04150 777 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 EEF2P13639 858 aaKnown RBP12.69□□□□□ -0.38
ZNF540-210ENST00000592533 CCT5P48643 541 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 ARID5AQ03989 594 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 TADA2BQ86TJ2 420 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 OLIG1Q8TAK6 271 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 SEC14L1Q92503 715 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 GMCL1Q96IK5 515 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 ZDHHC15Q96MV8 337 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 SPAG5Q96R06 1193 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 AMNQ9BXJ7 453 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 PACSIN2Q9UNF0 486 aaPredicted RBP12.69□□□□□ -0.38
ZNF540-210ENST00000592533 ESYT3A0FGR9 886 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 CCDC188H7C350 402 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 MPHOSPH10O00566 681 aaKnown RBP12.69□□□□□ -0.38
ZNF540-210ENST00000592533 KRT14P02533 472 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 GAP43P17677 238 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 NOP2P46087 812 aaKnown RBP12.69□□□□□ -0.38
ZNF540-210ENST00000592533 SLFN13Q68D06 897 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 ALKBH5Q6P6C2 394 aaKnown RBP12.69□□□□□ -0.38
ZNF540-210ENST00000592533 ATP6V1G3Q96LB4 118 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 TTC7AQ9ULT0 858 aaPredicted RBP12.69□□□□□ -0.38
ZNF540-210ENST00000592533 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 NCANO14594 1321 aa12.69□□□□□ -0.38
ZNF540-210ENST00000592533 PGRMC1O00264 195 aaKnown RBP12.68□□□□□ -0.38
ZNF540-210ENST00000592533 EYA4O95677 639 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 PRR16Q569H4 304 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 LMBR1Q8WVP7 490 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 IFT81Q8WYA0 676 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms