RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 SH3RF3Q8TEJ3 882 aaPredicted RBP6.06□□□□□ -1.44
ERCC1-216ENST00000592444 ZNF384Q8TF68 577 aa6.06□□□□□ -1.44
ERCC1-216ENST00000592444 ACSF2Q96CM8 615 aaPredicted RBP6.06□□□□□ -1.44
ERCC1-216ENST00000592444 ARHGEF3Q9NR81 526 aa6.06□□□□□ -1.44
ERCC1-216ENST00000592444 ZNF214Q9UL59 606 aaPredicted RBP6.06□□□□□ -1.44
ERCC1-216ENST00000592444 ADAMTS5Q9UNA0 930 aa6.06□□□□□ -1.44
ERCC1-216ENST00000592444 MAP4K5Q9Y4K4 846 aa6.06□□□□□ -1.44
ERCC1-216ENST00000592444 DDX49Q9Y6V7 483 aaKnown RBP6.06□□□□□ -1.44
ERCC1-216ENST00000592444 PATJQ8NI35 1801 aa6.06□□□□□ -1.44
ERCC1-216ENST00000592444 VWA5AO00534 786 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 BMP2P12643 396 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 GSK3AP49840 483 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 CPT1AP50416 773 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 ERVFC1P60507 584 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 CNTN2Q02246 1040 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 SCAPQ12770 1279 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 CERKLQ49MI3 558 aaPredicted RBP6.05□□□□□ -1.44
ERCC1-216ENST00000592444 TAPT1Q6NXT6 567 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 TATDN1Q6P1N9 297 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 DCLRE1AQ6PJP8 1040 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.05□□□□□ -1.44
ERCC1-216ENST00000592444 MAPKAPK5Q8IW41 473 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 FBXO16Q8IX29 292 aaPredicted RBP6.05□□□□□ -1.44
ERCC1-216ENST00000592444 LINC00528Q8N1L1 170 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 ANKRD35Q8N283 1001 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 MEIOBQ8N635 442 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 REPS2Q8NFH8 660 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 GPR152Q8TDT2 470 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 WHAMMQ8TF30 809 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 RSAD2Q8WXG1 361 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 RC3H2Q9HBD1 1191 aaKnown RBP6.05□□□□□ -1.44
ERCC1-216ENST00000592444 CABP5Q9NP86 173 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 FBXO28Q9NVF7 368 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 DENND2AQ9ULE3 1009 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 RAXQ9Y2V3 346 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 RIPK3Q9Y572 518 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 DNHD1Q96M86 4753 aa6.05□□□□□ -1.44
ERCC1-216ENST00000592444 EMSYQ7Z589 1322 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 MAFO75444 373 aaPredicted RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 FSHRP23945 695 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 GUCY1A2P33402 732 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 SIM2Q14190 667 aaPredicted RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 SEPT2Q15019 361 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 TRIM71Q2Q1W2 868 aaKnown RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 RARS2Q5T160 578 aaKnown RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 KANK3Q6NY19 840 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 RUFY4Q6ZNE9 571 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 KIAA1211Q6ZU35 1233 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 VASH1Q7L8A9 365 aaPredicted RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 RASGRP4Q8TDF6 673 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 TGFBRAP1Q8WUH2 860 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 SEPT8Q92599 483 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 WNT8BQ93098 351 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 FAM126AQ9BYI3 521 aaPredicted RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 GNL3LQ9NVN8 582 aaKnown RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 IGSF9Q9P2J2 1179 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 SAP30BPQ9UHR5 308 aaKnown RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 MTF2Q9Y483 593 aaPredicted RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 MRPL42Q9Y6G3 142 aaKnown RBP6.04□□□□□ -1.44
ERCC1-216ENST00000592444 PTPRQQ9UMZ3 2332 aa6.04□□□□□ -1.44
ERCC1-216ENST00000592444 MIA3Q5JRA6 1907 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 PLXNA4Q9HCM2 1894 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 POLQO75417 2590 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 DOPEY2Q9Y3R5 2298 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 IGHA1P01876 353 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 HLA-DOAP06340 250 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 ZNF806P0C7X5 589 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 SRFP11831 508 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 CEACAM1P13688 526 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 CLK2P49760 499 aaKnown RBP6.03□□□□□ -1.44
ERCC1-216ENST00000592444 CFHR1Q03591 330 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 LMOD3Q0VAK6 560 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 DUSP28Q4G0W2 176 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 ATAT1Q5SQI0 421 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 SPTY2D1Q68D10 685 aaPredicted RBP6.03□□□□□ -1.44
ERCC1-216ENST00000592444 RNF43Q68DV7 783 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 KIAA1841Q6NSI8 718 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 ATF7IPQ6VMQ6 1270 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 G2E3Q7L622 706 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 OTOP3Q7RTS5 596 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 ATG9AQ7Z3C6 839 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 C12orf76Q8N812 135 aaPredicted RBP6.03□□□□□ -1.44
ERCC1-216ENST00000592444 FAM181AQ8N9Y4 354 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 LINS1Q8NG48 757 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 OR6J1Q8NGC5 347 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 LPIN2Q92539 896 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 CASP10Q92851 521 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 GPKOWQ92917 476 aaPredicted RBP eCLIP6.03□□□□□ -1.44
ERCC1-216ENST00000592444 ZNF689Q96CS4 500 aaPredicted RBP6.03□□□□□ -1.44
ERCC1-216ENST00000592444 OSBPL7Q9BZF2 842 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 ARRDC1-AS1Q9H2J1 176 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 CCDC86Q9H6F5 360 aaKnown RBP6.03□□□□□ -1.44
ERCC1-216ENST00000592444 BCAS3Q9H6U6 928 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 PAXBP1Q9Y5B6 917 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 CACNA1FO60840 1977 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 PARP14Q460N5 1801 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 ACACAQ13085 2346 aa6.03□□□□□ -1.44
ERCC1-216ENST00000592444 FLT1P17948 1338 aa6.02□□□□□ -1.45
ERCC1-216ENST00000592444 FRMPD2Q68DX3 1309 aaPredicted RBP6.02□□□□□ -1.45
ERCC1-216ENST00000592444 MAGEB6P1A0A0J9YX57 407 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms