RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PRPF3O43395 683 aaKnown RBP21.47■■□□□ 1.03
CCDC43-205ENST00000592333 HBP1O60381 514 aa21.47■■□□□ 1.03
CCDC43-205ENST00000592333 SETQ01105 290 aaPredicted RBP21.47■■□□□ 1.03
CCDC43-205ENST00000592333 COL19A1Q14993 1142 aa21.47■■□□□ 1.03
CCDC43-205ENST00000592333 BLOC1S2Q6QNY1 142 aa21.47■■□□□ 1.03
CCDC43-205ENST00000592333 ABHD15Q6UXT9 468 aa21.47■■□□□ 1.03
CCDC43-205ENST00000592333 C11orf84Q9BUA3 381 aaPredicted RBP21.47■■□□□ 1.03
CCDC43-205ENST00000592333 PLVAPQ9BX97 442 aa21.47■■□□□ 1.03
CCDC43-205ENST00000592333 TBC1D22BQ9NU19 505 aa21.47■■□□□ 1.03
CCDC43-205ENST00000592333 TRPV2Q9Y5S1 764 aa21.47■■□□□ 1.03
CCDC43-205ENST00000592333 ADGRA3Q8IWK6 1321 aa21.47■■□□□ 1.03
CCDC43-205ENST00000592333 TCF20Q9UGU0 1960 aaKnown RBP21.47■■□□□ 1.03
CCDC43-205ENST00000592333 DGKIO75912 1065 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 REC8O95072 547 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 PSMA5P28066 241 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 ADD1P35611 737 aaKnown RBP21.46■■□□□ 1.03
CCDC43-205ENST00000592333 BMPR1AP36894 532 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 IGBP1P78318 339 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 ODR4Q5SWX8 454 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 Q6ZUG5 572 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 CRIPAKQ8N1N5 446 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 BANK1Q8NDB2 785 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 BICD2Q8TD16 824 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 PGBD1Q96JS3 809 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 NECAB3Q96P71 396 aaPredicted RBP21.46■■□□□ 1.03
CCDC43-205ENST00000592333 CELF4Q9BZC1 486 aaKnown RBP21.46■■□□□ 1.03
CCDC43-205ENST00000592333 IGSF9BQ9UPX0 1349 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 TTC3P53804 2025 aa21.46■■□□□ 1.03
CCDC43-205ENST00000592333 IGLV3-22A0A075B6J6 115 aa21.45■■□□□ 1.02
CCDC43-205ENST00000592333 IPO5O00410 1097 aaKnown RBP21.45■■□□□ 1.02
CCDC43-205ENST00000592333 DHX15O43143 795 aaKnown RBP21.45■■□□□ 1.02
CCDC43-205ENST00000592333 EVCP57679 992 aa21.45■■□□□ 1.02
CCDC43-205ENST00000592333 NAALADL2Q58DX5 795 aa21.45■■□□□ 1.02
CCDC43-205ENST00000592333 ZNF484Q5JVG2 852 aa21.45■■□□□ 1.02
CCDC43-205ENST00000592333 MIS18BP1Q6P0N0 1132 aa21.45■■□□□ 1.02
CCDC43-205ENST00000592333 MTHFD1LQ6UB35 978 aa21.45■■□□□ 1.02
CCDC43-205ENST00000592333 PLA2G4DQ86XP0 818 aa21.45■■□□□ 1.02
CCDC43-205ENST00000592333 SMAP1Q8IYB5 467 aaPredicted RBP21.45■■□□□ 1.02
CCDC43-205ENST00000592333 REXO1Q8N1G1 1221 aaKnown RBP21.45■■□□□ 1.02
CCDC43-205ENST00000592333 ATP8B4Q8TF62 1192 aa21.45■■□□□ 1.02
CCDC43-205ENST00000592333 NSUN3Q9H649 340 aaKnown RBP21.45■■□□□ 1.02
CCDC43-205ENST00000592333 AGO3Q9H9G7 860 aaKnown RBP21.45■■□□□ 1.02
CCDC43-205ENST00000592333 TMEM260Q9NX78 707 aa21.45■■□□□ 1.02
CCDC43-205ENST00000592333 BRWD1Q9NSI6 2320 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 NLRC5Q86WI3 1866 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 FAM86B1E9PN63 330 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 FAM86B2P0C5J1 330 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 LINC00271P0C7V0 271 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 STAG3L1P0CL83 205 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 ZNF746Q6NUN9 644 aaPredicted RBP21.44■■□□□ 1.02
CCDC43-205ENST00000592333 ZNF710Q8N1W2 664 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 NEK9Q8TD19 979 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 BRF1Q92994 677 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 P2RX5Q93086 422 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 PABPC5Q96DU9 382 aaKnown RBP21.44■■□□□ 1.02
CCDC43-205ENST00000592333 JAKMIP1Q96N16 626 aaKnown RBP21.44■■□□□ 1.02
CCDC43-205ENST00000592333 RNF26Q9BY78 433 aaPredicted RBP21.44■■□□□ 1.02
CCDC43-205ENST00000592333 FAM49AQ9H0Q0 323 aaPredicted RBP21.44■■□□□ 1.02
CCDC43-205ENST00000592333 SNX14Q9Y5W7 946 aa21.44■■□□□ 1.02
CCDC43-205ENST00000592333 BACH1O14867 736 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 CCNE2O96020 404 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 COL9A1P20849 921 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 RPS6KB1P23443 525 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 CD52P31358 61 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 CIITAP33076 1130 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 KRT76Q01546 638 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 AKAP17AQ02040 695 aaKnown RBP21.43■■□□□ 1.02
CCDC43-205ENST00000592333 APOBRQ0VD83 1088 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 PAK2Q13177 524 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 BTG3Q14201 252 aaPredicted RBP21.43■■□□□ 1.02
CCDC43-205ENST00000592333 PKN1Q16512 942 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 JAKMIP3Q5VZ66 844 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 SKAP1Q86WV1 359 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 NPAS4Q8IUM7 802 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 CMTR2Q8IYT2 770 aaKnown RBP21.43■■□□□ 1.02
CCDC43-205ENST00000592333 CCDC148Q8NFR7 591 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 ZNF302Q9NR11 478 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 NAP1L2Q9ULW6 460 aaPredicted RBP21.43■■□□□ 1.02
CCDC43-205ENST00000592333 PADI3Q9ULW8 664 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 FAM50BQ9Y247 325 aa21.43■■□□□ 1.02
CCDC43-205ENST00000592333 KCNA5P22460 613 aa21.42■■□□□ 1.02
CCDC43-205ENST00000592333 KLRC1P26715 233 aa21.42■■□□□ 1.02
CCDC43-205ENST00000592333 CTNNB1P35222 781 aa21.42■■□□□ 1.02
CCDC43-205ENST00000592333 FAM177A1Q8N128 213 aaPredicted RBP21.42■■□□□ 1.02
CCDC43-205ENST00000592333 BBXQ8WY36 941 aaPredicted RBP21.42■■□□□ 1.02
CCDC43-205ENST00000592333 ZNF577Q9BSK1 485 aa21.42■■□□□ 1.02
CCDC43-205ENST00000592333 SH3GLB2Q9NR46 395 aa21.42■■□□□ 1.02
CCDC43-205ENST00000592333 TCEAL9Q9UHQ7 104 aa21.42■■□□□ 1.02
CCDC43-205ENST00000592333 MAFBQ9Y5Q3 323 aaPredicted RBP21.42■■□□□ 1.02
CCDC43-205ENST00000592333 IFNAR1P17181 557 aa21.41■■□□□ 1.02
CCDC43-205ENST00000592333 NTRK3Q16288 839 aa21.41■■□□□ 1.02
CCDC43-205ENST00000592333 PDXDC2PQ6P474 469 aa21.41■■□□□ 1.02
CCDC43-205ENST00000592333 RTN4RL1Q86UN2 441 aaPredicted RBP21.41■■□□□ 1.02
CCDC43-205ENST00000592333 CCDC60Q8IWA6 550 aaPredicted RBP21.41■■□□□ 1.02
CCDC43-205ENST00000592333 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.41■■□□□ 1.02
CCDC43-205ENST00000592333 CEP131Q9UPN4 1083 aa21.41■■□□□ 1.02
CCDC43-205ENST00000592333 GRXCR2A6NFK2 248 aa21.4■■□□□ 1.02
CCDC43-205ENST00000592333 USP11P51784 963 aa21.4■■□□□ 1.02
CCDC43-205ENST00000592333 SWSAP1Q6NVH7 229 aa21.4■■□□□ 1.02
CCDC43-205ENST00000592333 FAM178BQ8IXR5 827 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms