RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ELF4Q99607 663 aaPredicted RBP4.88□□□□□ -1.63
VMP1-212ENST00000591782 TACO1Q9BSH4 297 aaKnown RBP4.88□□□□□ -1.63
VMP1-212ENST00000591782 INCENPQ9NQS7 918 aa4.88□□□□□ -1.63
VMP1-212ENST00000591782 SPTLC3Q9NUV7 552 aa4.88□□□□□ -1.63
VMP1-212ENST00000591782 ARHGAP20Q9P2F6 1191 aa4.88□□□□□ -1.63
VMP1-212ENST00000591782 SPO11Q9Y5K1 396 aa4.88□□□□□ -1.63
VMP1-212ENST00000591782 SHROOM4Q9ULL8 1493 aa4.88□□□□□ -1.63
VMP1-212ENST00000591782 PRAMEF22A3QJZ6 481 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 FKBP9O95302 570 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 MPIG6BO95866 241 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 RPL13P26373 211 aaKnown RBP4.87□□□□□ -1.63
VMP1-212ENST00000591782 CNGA1P29973 690 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 KPNA1P52294 538 aaPredicted RBP4.87□□□□□ -1.63
VMP1-212ENST00000591782 MLLT6P55198 1093 aaPredicted RBP4.87□□□□□ -1.63
VMP1-212ENST00000591782 STRN3Q13033 797 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 DHCR24Q15392 516 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 CT47A1Q5JQC4 288 aaPredicted RBP4.87□□□□□ -1.63
VMP1-212ENST00000591782 RNF187Q5TA31 235 aaPredicted RBP4.87□□□□□ -1.63
VMP1-212ENST00000591782 PRAMEF18Q5VWM3 479 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 TTLL7Q6ZT98 887 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 FKBP9P1Q75LS8 142 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 KRT26Q7Z3Y9 468 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 CARFQ8N187 725 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 AFAP1L2Q8N4X5 818 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 EFHBQ8N7U6 833 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 STPG3Q8N7X2 389 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 WRNIP1Q96S55 665 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 FAM126AQ9BYI3 521 aaPredicted RBP4.87□□□□□ -1.63
VMP1-212ENST00000591782 SPC25Q9HBM1 224 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 ACSS2Q9NR19 701 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 TOMM22Q9NS69 142 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 NTMQ9P121 344 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 ASB1Q9Y576 335 aa4.87□□□□□ -1.63
VMP1-212ENST00000591782 GOLGA6L22H0YM25 854 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 DDX3XO00571 662 aaKnown RBP eCLIP4.86□□□□□ -1.63
VMP1-212ENST00000591782 TGM5O43548 720 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 DNAJC6O75061 913 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 CYP17A1P05093 508 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 COL6A1P12109 1028 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 ZNF28P17035 718 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 BPIP17213 487 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 ID4P47928 161 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 LSSP48449 732 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 FNTBP49356 437 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 SARSP49591 514 aaKnown RBP4.86□□□□□ -1.63
VMP1-212ENST00000591782 ESRP1Q6NXG1 681 aaKnown RBP4.86□□□□□ -1.63
VMP1-212ENST00000591782 TRMT10BQ6PF06 316 aaKnown RBP4.86□□□□□ -1.63
VMP1-212ENST00000591782 LRSAM1Q6UWE0 723 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 LCNL1Q6ZST4 164 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 RTN4RL1Q86UN2 441 aaPredicted RBP4.86□□□□□ -1.63
VMP1-212ENST00000591782 ZCCHC14Q8WYQ9 949 aaKnown RBP4.86□□□□□ -1.63
VMP1-212ENST00000591782 USP7Q93009 1102 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 FOXRED1Q96CU9 486 aaPredicted RBP4.86□□□□□ -1.63
VMP1-212ENST00000591782 AMNQ9BXJ7 453 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 EMC7Q9NPA0 242 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 KCND1Q9NSA2 647 aa4.86□□□□□ -1.63
VMP1-212ENST00000591782 NEMP1O14524 444 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 CYP7B1O75881 506 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 FBXO21O94952 628 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 ZSCAN22P10073 491 aaPredicted RBP4.85□□□□□ -1.63
VMP1-212ENST00000591782 POU3F3P20264 500 aaPredicted RBP4.85□□□□□ -1.63
VMP1-212ENST00000591782 IL13P35225 146 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 JAG1P78504 1218 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 IL13RA1P78552 427 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 OCRLQ01968 901 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 SMAD2Q15796 467 aaKnown RBP4.85□□□□□ -1.63
VMP1-212ENST00000591782 C16orf92Q96LL3 132 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 TTC1Q99614 292 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 SPATA25Q9BR10 227 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 TMX1Q9H3N1 280 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 IFT22Q9H7X7 185 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 GALNT8Q9NY28 637 aa4.85□□□□□ -1.63
VMP1-212ENST00000591782 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
VMP1-212ENST00000591782 TRIM13O60858 407 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 EYA4O95677 639 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 KNG1P01042 644 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 PRLP01236 227 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 ECE1P42892 770 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 SLURP1P55000 103 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 SMAD3P84022 425 aaKnown RBP4.84□□□□□ -1.63
VMP1-212ENST00000591782 NFKB2Q00653 900 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 ALDH6A1Q02252 535 aaKnown RBP4.84□□□□□ -1.63
VMP1-212ENST00000591782 MCTP2Q6DN12 878 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 C11orf74Q86VG3 221 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 ZNF761Q86XN6 746 aaPredicted RBP4.84□□□□□ -1.63
VMP1-212ENST00000591782 PASD1Q8IV76 773 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 ADAMTS17Q8TE56 1095 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 RTF1Q92541 710 aaKnown RBP4.84□□□□□ -1.63
VMP1-212ENST00000591782 MS4A5Q9H3V2 200 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 ZMAT4Q9H898 229 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 L2HGDHQ9H9P8 463 aa4.84□□□□□ -1.63
VMP1-212ENST00000591782 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
VMP1-212ENST00000591782 UBA6A0AVT1 1052 aaPredicted RBP4.83□□□□□ -1.64
VMP1-212ENST00000591782 LCHNA4D1U4 455 aa4.83□□□□□ -1.64
VMP1-212ENST00000591782 CHGBP05060 677 aa4.83□□□□□ -1.64
VMP1-212ENST00000591782 RGS3P49796 1198 aa4.83□□□□□ -1.64
VMP1-212ENST00000591782 SLC6A3Q01959 620 aa4.83□□□□□ -1.64
VMP1-212ENST00000591782 EPHA7Q15375 998 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms