RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TOPORSQ9NS56 1045 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 A0A087WUV0 522 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 A6NJR5 290 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 CD2BP2O95400 341 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 HMGCS2P54868 508 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 CUL4BQ13620 913 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 GTF3C2Q8WUA4 911 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 PGRMC1O00264 195 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 ENTPD3O75355 529 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 CCT5P48643 541 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 ZNF658Q5TYW1 1059 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 RNF168Q8IYW5 571 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 LRRC4Q9HBW1 653 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 SLFN14P0C7P3 912 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 KIF23Q02241 960 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 EHHADHQ08426 723 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 ACTR5Q9H9F9 607 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 GGA3Q9NZ52 723 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 PLA2G4BP0C869 781 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 PHKA2P46019 1235 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 HUNKP57058 714 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 SMIM5Q71RC9 77 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 RRP15Q9Y3B9 282 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 DAAM1Q9Y4D1 1078 aa14.38□□□□□ -0.11
SMARCA4-216ENST00000591545 NRKQ7Z2Y5 1582 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 DENND3A2RUS2 1198 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 LRRD1A4D1F6 860 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 NR5A1Q13285 461 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 ANGEL2Q5VTE6 544 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 BSPRYQ5W0U4 402 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 ALS2CLQ60I27 953 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 SLC44A5Q8NCS7 719 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 CCHCR1Q8TD31 782 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 RPAP3Q9H6T3 665 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 SYNJ2BP-COX16A0A087WUM0 186 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 SART1O43290 800 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 MED7O43513 233 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 MGEA5O60502 916 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 OPHN1O60890 802 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 PANX2Q96RD6 677 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 ATP6V0A4Q9HBG4 840 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 COX16Q9P0S2 106 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 RWDD2AQ9UIY3 292 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 ZNF148Q9UQR1 794 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 DLC1Q96QB1 1528 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 LDHAP00338 332 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 GMPSP49915 693 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 OSTNP61366 133 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 FKBP3Q00688 224 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 KCNV1Q6PIU1 500 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 NME8Q8N427 588 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 EFCC1Q9HA90 598 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 CLTAP09496 248 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 RASSF7Q02833 373 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 TNFAIP2Q03169 654 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 COG2Q14746 738 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 ALX1Q15699 326 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 MUM1L1Q5H9M0 696 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 WHAMMQ8TF30 809 aa14.37□□□□□ -0.11
SMARCA4-216ENST00000591545 MYO1FO00160 1098 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 HEXIM1O94992 359 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 SFNP31947 248 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 FOXO4P98177 505 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 ARHGEF18Q6ZSZ5 1173 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 THAP9Q9H5L6 903 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 NXF1Q9UBU9 619 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 USP42Q9H9J4 1324 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 GOLGA8CPA6NN73 597 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 EIF3BP55884 814 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 PSMD2Q13200 908 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 CTTNQ14247 550 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 PLCB4Q15147 1175 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 ARL6IP4Q66PJ3 421 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 TWF2Q6IBS0 349 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 VSTM4Q8IW00 320 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 LINC00301Q8NCQ3 95 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 NEDD1Q8NHV4 660 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 MAGOHBQ96A72 148 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 NCAPGQ9BPX3 1015 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 CPSF3Q9UKF6 684 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 MYO3AQ8NEV4 1616 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 UBN2Q6ZU65 1347 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 PLEKHA8P1O95397 391 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 AFPP02771 609 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 KRT10P13645 584 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 ZBED6P86452 979 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 SREBF2Q12772 1141 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 ITPK1Q13572 414 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 SLMAPQ14BN4 828 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 URGCPQ8TCY9 931 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 NEK9Q8TD19 979 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 DDX27Q96GQ7 796 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 MSTO1Q9BUK6 570 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 PLEKHA4Q9H4M7 779 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 SLC8A2Q9UPR5 921 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 BAG2O95816 211 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 INHBAP08476 426 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 RBL2Q08999 1139 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms