RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 C11orf49Q9H6J7 331 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 KIAA1024Q9UPX6 916 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 GRIN2DO15399 1336 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 TCHHQ07283 1943 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 TMEM150BA6NC51 233 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 CAPN2P17655 700 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 PRKCEQ02156 737 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 SHC4Q6S5L8 630 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 C7orf31Q8N865 590 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 PIGOQ8TEQ8 1089 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 CDK5RAP3Q96JB5 506 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 TUFT1Q9NNX1 390 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 NRBP2Q9NSY0 501 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 STK24Q9Y6E0 443 aa20.55■□□□□ 0.88
CROCCP3-205ENST00000591316 FRMPD3Q5JV73 1810 aa20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 HAS3O00219 553 aa20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 DKC1O60832 514 aaKnown RBP eCLIP20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 SLC26A2P50443 739 aa20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 IGBP1P78318 339 aa20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 KARSQ15046 597 aaKnown RBP20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 ADALQ6DHV7 355 aa20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 POTEGQ6S5H5 508 aa20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 ZNF579Q8NAF0 562 aaKnown RBP20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 NEK9Q8TD19 979 aa20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 HDAC6Q9UBN7 1215 aa20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 SEPT9Q9UHD8 586 aaPredicted RBP20.54■□□□□ 0.88
CROCCP3-205ENST00000591316 IGSF9BQ9UPX0 1349 aa20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 GOLGA6L4A6NEF3 574 aa20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 OATP04181 439 aa20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 INSRRP14616 1297 aa20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 YWHABP31946 246 aaKnown RBP20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 SLC39A5Q6ZMH5 540 aa20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 C4orf19Q8IY42 314 aa20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 ATP8B4Q8TF62 1192 aa20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 CALML4Q96GE6 196 aa20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 DDX19AQ9NUU7 478 aaKnown RBP20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 SETD4Q9NVD3 440 aa20.53■□□□□ 0.88
CROCCP3-205ENST00000591316 A0A0U1RQG5 324 aaPredicted RBP20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 SMIM10L2AP0DMW4 78 aa20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 SMIM10L2BP0DMW5 78 aa20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 COL6A1P12109 1028 aa20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 TXLNAP40222 546 aa20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 CSPP1Q1MSJ5 1256 aa20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 XKR3Q5GH77 459 aa20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 BBXQ8WY36 941 aaPredicted RBP20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 PNMA5Q96PV4 448 aa20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 CCSER1Q9C0I3 900 aa20.52■□□□□ 0.88
CROCCP3-205ENST00000591316 ARVCFO00192 962 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 HBP1O60381 514 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 STBD1O95210 358 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 ZNF200P98182 395 aaPredicted RBP20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 PPFIA1Q13136 1202 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 GRB10Q13322 594 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 MTERF2Q49AM1 385 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 PLA2G4FQ68DD2 849 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 ANO5Q75V66 913 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 OTUD6AQ7L8S5 288 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 PDILTQ8N807 584 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 TRAPPC12Q8WVT3 735 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 NACC1Q96RE7 527 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 FAM13BQ9NYF5 915 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 CCDC39Q9UFE4 941 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 A0A1B0GVL5 298 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 E9PMD0 336 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 PRPF40AO75400 957 aaKnown RBP20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 NPEPPSP55786 919 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 XKR9Q5GH70 373 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 ZBTB10Q96DT7 871 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 FAM167AQ96KS9 214 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 DNM3Q9UQ16 869 aa20.51■□□□□ 0.87
CROCCP3-205ENST00000591316 C17orf102A2RUQ5 167 aa20.5■□□□□ 0.87
CROCCP3-205ENST00000591316 HIC1Q14526 733 aa20.5■□□□□ 0.87
CROCCP3-205ENST00000591316 GRIK4Q16099 956 aa20.5■□□□□ 0.87
CROCCP3-205ENST00000591316 RRAGBQ5VZM2 374 aa20.5■□□□□ 0.87
CROCCP3-205ENST00000591316 RESP18Q5W5W9 173 aa20.5■□□□□ 0.87
CROCCP3-205ENST00000591316 NFRKBQ6P4R8 1299 aa20.5■□□□□ 0.87
CROCCP3-205ENST00000591316 CEP170P1Q96L14 293 aa20.5■□□□□ 0.87
CROCCP3-205ENST00000591316 GBP4Q96PP9 640 aa20.5■□□□□ 0.87
CROCCP3-205ENST00000591316 NT5C3AQ9H0P0 336 aa20.5■□□□□ 0.87
CROCCP3-205ENST00000591316 KDM3AQ9Y4C1 1321 aa20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 GADD45BO75293 160 aaPredicted RBP20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 LYPLA2O95372 231 aa20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 PLCG1P19174 1290 aa20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 CMA1P23946 247 aa20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 DHX8Q14562 1220 aaKnown RBP20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 GDF6Q6KF10 455 aaPredicted RBP20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 KCNK18Q7Z418 384 aa20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 CCDC43Q96MW1 224 aaKnown RBP20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 NIFKQ9BYG3 293 aaKnown RBP20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 GTF2IRD1Q9UHL9 959 aa20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 NRCAMQ92823 1304 aa20.49■□□□□ 0.87
CROCCP3-205ENST00000591316 DNAH12Q6ZR08 3092 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 A0A087X0B3 334 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 PQBP1O60828 265 aaKnown RBP20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 SSBP05455 408 aaKnown RBP eCLIP20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 MUTP22033 750 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 CDK7P50613 346 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 LRRC26Q2I0M4 334 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 ZNF484Q5JVG2 852 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 HYIQ5T013 277 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms