RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.55□□□□□ -0.245e-6■■■■■ 27.7
PDE4A-207ENST00000590407 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 ZSCAN5CA6NGD5 496 aaPredicted RBP13.54□□□□□ -0.24
PDE4A-207ENST00000590407 USP17L10C9JJH3 530 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 H0YGN5 161 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 MED24O75448 989 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 FSBPO95073 299 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 INPP5BP32019 993 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 MDH1P40925 334 aaKnown RBP13.54□□□□□ -0.24
PDE4A-207ENST00000590407 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 AGBL2Q5U5Z8 902 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 TTBK2Q6IQ55 1244 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 ALKBH5Q6P6C2 394 aaKnown RBP13.54□□□□□ -0.24
PDE4A-207ENST00000590407 FMNL3Q8IVF7 1028 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 FAM20AQ96MK3 541 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 SPAG5Q96R06 1193 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 COA1Q9GZY4 146 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 TYW1Q9NV66 732 aaKnown RBP13.54□□□□□ -0.24
PDE4A-207ENST00000590407 TBC1D7Q9P0N9 293 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 DIS3Q9Y2L1 958 aaKnown RBP13.54□□□□□ -0.24
PDE4A-207ENST00000590407 NFS1Q9Y697 457 aa13.54□□□□□ -0.24
PDE4A-207ENST00000590407 ESYT3A0FGR9 886 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 KCNK3O14649 394 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 MEFVO15553 781 aaPredicted RBP13.53□□□□□ -0.24
PDE4A-207ENST00000590407 KRT18P05783 430 aaKnown RBP13.53□□□□□ -0.24
PDE4A-207ENST00000590407 XRCC5P13010 732 aaKnown RBP13.53□□□□□ -0.24
PDE4A-207ENST00000590407 MMP14P50281 582 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 PPP2R5EQ16537 467 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 RUFY4Q6ZNE9 571 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 PTF1AQ7RTS3 328 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 SH2D3CQ8N5H7 860 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 SIX2Q9NPC8 291 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 POLLQ9UGP5 575 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 DNM3Q9UQ16 869 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 PLAAQ9Y263 795 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 MYH4Q9Y623 1939 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 NCANO14594 1321 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 NPHP3-ACAD11A0A0J9YXS1 232 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 KLRG2A4D1S0 409 aaPredicted RBP13.53□□□□□ -0.24
PDE4A-207ENST00000590407 GOLGA6L10A6NI86 522 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 FAM107AO95990 144 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 FOSP01100 380 aaPredicted RBP13.53□□□□□ -0.24
PDE4A-207ENST00000590407 H2AFZP0C0S5 128 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 FERP16591 822 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 ERCC3P19447 782 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 CIITAP33076 1130 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 HOXD13P35453 343 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 DRP2Q13474 957 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 SLC15A2Q16348 729 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 SWT1Q5T5J6 900 aaKnown RBP13.53□□□□□ -0.24
PDE4A-207ENST00000590407 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 H2AFVQ71UI9 128 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 CATSPER3Q86XQ3 398 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 CNPY4Q8N129 248 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 DDX4Q9NQI0 724 aaKnown RBP13.53□□□□□ -0.24
PDE4A-207ENST00000590407 NYAP2Q9P242 653 aa13.53□□□□□ -0.24
PDE4A-207ENST00000590407 VGLL3A8MV65 326 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 ANKRD65E5RJM6 399 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 GCOM1H8Y6P7 765 aaPredicted RBP13.52□□□□□ -0.25
PDE4A-207ENST00000590407 EIF3DO15371 548 aaKnown RBP eCLIP13.52□□□□□ -0.25
PDE4A-207ENST00000590407 KIAA0754O94854 1291 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 HLA-DOAP06340 250 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 PAEPP09466 180 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 MYZAPP0CAP1 466 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 SPATA31C1P0DKV0 1188 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 GAP43P17677 238 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 SLC9A1P19634 815 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 HSD17B3P37058 310 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 USP8P40818 1118 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 GUCY2FP51841 1108 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 ARHGAP4P98171 946 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 ARID5AQ03989 594 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 PLCB4Q15147 1175 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 CLUL1Q15846 466 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 QRICH1Q2TAL8 776 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 HHIPL2Q6UWX4 724 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 MAATS1Q7Z4T9 603 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 GPIHBP1Q8IV16 184 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 METTL13Q8N6R0 699 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
PDE4A-207ENST00000590407 BORCS6Q96GS4 357 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 CEP89Q96ST8 783 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 MKNK1Q9BUB5 465 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 POLR3CQ9BUI4 534 aaPredicted RBP13.52□□□□□ -0.25
PDE4A-207ENST00000590407 OLFML3Q9NRN5 406 aa13.52□□□□□ -0.25
PDE4A-207ENST00000590407 PACSIN2Q9UNF0 486 aaPredicted RBP13.52□□□□□ -0.25
PDE4A-207ENST00000590407 NOC2LQ9Y3T9 749 aaKnown RBP13.52□□□□□ -0.25
PDE4A-207ENST00000590407 POTEFA5A3E0 1075 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 MEIS2O14770 477 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 SART1O43290 800 aaKnown RBP13.51□□□□□ -0.25
PDE4A-207ENST00000590407 CEP104O60308 925 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 ACTN1P12814 892 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 SREBF1P36956 1147 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 FNTAP49354 379 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 CASP5P51878 434 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 UAP1Q16222 522 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms