RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 GALNT17Q6IS24 598 aa23.33■■□□□ 1.33
CIRBP-226ENST00000590171 PDXDC2PQ6P474 469 aa23.33■■□□□ 1.33
CIRBP-226ENST00000590171 SMAP1Q8IYB5 467 aaPredicted RBP23.33■■□□□ 1.33
CIRBP-226ENST00000590171 PPM1EQ8WY54 764 aa23.33■■□□□ 1.33
CIRBP-226ENST00000590171 APBB2Q92870 758 aa23.33■■□□□ 1.33
CIRBP-226ENST00000590171 PCDHA2Q9Y5H9 948 aa23.33■■□□□ 1.33
CIRBP-226ENST00000590171 SIP14410 1827 aa23.33■■□□□ 1.32
CIRBP-226ENST00000590171 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.32■■□□□ 1.32
CIRBP-226ENST00000590171 HBP1O60381 514 aa23.32■■□□□ 1.32
CIRBP-226ENST00000590171 LARGE1O95461 756 aa23.32■■□□□ 1.32
CIRBP-226ENST00000590171 MRPS6P82932 125 aaKnown RBP23.32■■□□□ 1.32
CIRBP-226ENST00000590171 ARNTL2Q8WYA1 636 aa23.32■■□□□ 1.32
CIRBP-226ENST00000590171 PHF20Q9BVI0 1012 aa23.32■■□□□ 1.32
CIRBP-226ENST00000590171 TCEAL9Q9UHQ7 104 aa23.32■■□□□ 1.32
CIRBP-226ENST00000590171 MAFBQ9Y5Q3 323 aaPredicted RBP23.32■■□□□ 1.32
CIRBP-226ENST00000590171 CHD7Q9P2D1 2997 aa23.31■■□□□ 1.32
CIRBP-226ENST00000590171 TDP2O95551 362 aa23.31■■□□□ 1.32
CIRBP-226ENST00000590171 RPLP2P05387 115 aaKnown RBP23.31■■□□□ 1.32
CIRBP-226ENST00000590171 ME3Q16798 604 aa23.31■■□□□ 1.32
CIRBP-226ENST00000590171 FBXO47Q5MNV8 452 aa23.31■■□□□ 1.32
CIRBP-226ENST00000590171 MTHFD1LQ6UB35 978 aa23.31■■□□□ 1.32
CIRBP-226ENST00000590171 SLC5A5Q92911 643 aa23.31■■□□□ 1.32
CIRBP-226ENST00000590171 GJB4Q9NTQ9 266 aa23.31■■□□□ 1.32
CIRBP-226ENST00000590171 PCDHA10Q9Y5I2 948 aa23.31■■□□□ 1.32
CIRBP-226ENST00000590171 MICAL3Q7RTP6 2002 aa23.31■■□□□ 1.32
CIRBP-226ENST00000590171 COL1A2P08123 1366 aa23.3■■□□□ 1.32
CIRBP-226ENST00000590171 SMIM35A0A1B0GVV1 85 aa23.3■■□□□ 1.32
CIRBP-226ENST00000590171 LINC01553A4QN01 128 aa23.3■■□□□ 1.32
CIRBP-226ENST00000590171 PSAPP07602 524 aa23.3■■□□□ 1.32
CIRBP-226ENST00000590171 TMEM62Q0P6H9 643 aa23.3■■□□□ 1.32
CIRBP-226ENST00000590171 Q4G0T1 1027 aa23.3■■□□□ 1.32
CIRBP-226ENST00000590171 NECAB1Q8N987 351 aa23.3■■□□□ 1.32
CIRBP-226ENST00000590171 GJA10Q969M2 543 aa23.3■■□□□ 1.32
CIRBP-226ENST00000590171 RIT2Q99578 217 aa23.3■■□□□ 1.32
CIRBP-226ENST00000590171 CYP3A7-CYP3A51PA0A087WV96 503 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 WDR64B1ANS9 1081 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 ZBTB42B2RXF5 422 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 CYP3A7P24462 503 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 KLRC1P26715 233 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 NEK4P51957 841 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 HTRA4P83105 476 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-226ENST00000590171 NONOQ15233 471 aaKnown RBP eCLIP23.29■■□□□ 1.32
CIRBP-226ENST00000590171 CCDC85BQ15834 202 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-226ENST00000590171 IER5Q5VY09 327 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 TSHZ1Q6ZSZ6 1077 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 KRT25Q7Z3Z0 450 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 CKAP2LQ8IYA6 745 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 KAT6AQ92794 2004 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 GTF3C6Q969F1 213 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 TOP1MTQ969P6 601 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 PRDM6Q9NQX0 595 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 GABBR1Q9UBS5 961 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 SAMM50Q9Y512 469 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 INSL6Q9Y581 213 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 TRPV2Q9Y5S1 764 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 IGSF9BQ9UPX0 1349 aa23.29■■□□□ 1.32
CIRBP-226ENST00000590171 UNC80Q8N2C7 3258 aa23.28■■□□□ 1.32
CIRBP-226ENST00000590171 DLL1O00548 723 aa23.28■■□□□ 1.32
CIRBP-226ENST00000590171 GAS7O60861 476 aa23.28■■□□□ 1.32
CIRBP-226ENST00000590171 FDPSP14324 419 aaKnown RBP23.28■■□□□ 1.32
CIRBP-226ENST00000590171 INF2Q27J81 1249 aa23.28■■□□□ 1.32
CIRBP-226ENST00000590171 ZNF484Q5JVG2 852 aa23.28■■□□□ 1.32
CIRBP-226ENST00000590171 LRCH2Q5VUJ6 765 aa23.28■■□□□ 1.32
CIRBP-226ENST00000590171 BBXQ8WY36 941 aaPredicted RBP23.28■■□□□ 1.32
CIRBP-226ENST00000590171 MBOAT7Q96N66 472 aa23.28■■□□□ 1.32
CIRBP-226ENST00000590171 TEKT3Q9BXF9 490 aa23.28■■□□□ 1.32
CIRBP-226ENST00000590171 UNC45AQ9H3U1 944 aa23.28■■□□□ 1.32
CIRBP-226ENST00000590171 AGO3Q9H9G7 860 aaKnown RBP23.28■■□□□ 1.32
CIRBP-226ENST00000590171 ORC3Q9UBD5 711 aaPredicted RBP23.28■■□□□ 1.32
CIRBP-226ENST00000590171 CHMP2AO43633 222 aa23.27■■□□□ 1.32
CIRBP-226ENST00000590171 PSMD10O75832 226 aa23.27■■□□□ 1.32
CIRBP-226ENST00000590171 UPP2O95045 317 aa23.27■■□□□ 1.32
CIRBP-226ENST00000590171 XBP1P17861 261 aa23.27■■□□□ 1.32
CIRBP-226ENST00000590171 CD52P31358 61 aa23.27■■□□□ 1.32
CIRBP-226ENST00000590171 MOXD1Q6UVY6 613 aa23.27■■□□□ 1.32
CIRBP-226ENST00000590171 TRMT1LQ7Z2T5 733 aaKnown RBP23.27■■□□□ 1.32
CIRBP-226ENST00000590171 SP7Q8TDD2 431 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-226ENST00000590171 OXER1Q8TDS5 423 aa23.27■■□□□ 1.32
CIRBP-226ENST00000590171 DISC1Q9NRI5 854 aa23.27■■□□□ 1.32
CIRBP-226ENST00000590171 MTCH2Q9Y6C9 303 aa23.27■■□□□ 1.32
CIRBP-226ENST00000590171 M0QZ92 97 aa23.26■■□□□ 1.31
CIRBP-226ENST00000590171 POU3F3P20264 500 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-226ENST00000590171 ERVK-21P61565 698 aa23.26■■□□□ 1.31
CIRBP-226ENST00000590171 GRB10Q13322 594 aa23.26■■□□□ 1.31
CIRBP-226ENST00000590171 KRT40Q6A162 431 aa23.26■■□□□ 1.31
CIRBP-226ENST00000590171 MICALL1Q8N3F8 863 aa23.26■■□□□ 1.31
CIRBP-226ENST00000590171 NME8Q8N427 588 aa23.26■■□□□ 1.31
CIRBP-226ENST00000590171 TGS1Q96RS0 853 aaKnown RBP23.26■■□□□ 1.31
CIRBP-226ENST00000590171 CELF4Q9BZC1 486 aaKnown RBP23.26■■□□□ 1.31
CIRBP-226ENST00000590171 MTUS1Q9ULD2 1270 aa23.26■■□□□ 1.31
CIRBP-226ENST00000590171 SQORQ9Y6N5 450 aa23.26■■□□□ 1.31
CIRBP-226ENST00000590171 KDM3AQ9Y4C1 1321 aa23.26■■□□□ 1.31
CIRBP-226ENST00000590171 CCDC194A0A1B0GVG4 234 aa23.25■■□□□ 1.31
CIRBP-226ENST00000590171 ZNF862O60290 1169 aa23.25■■□□□ 1.31
CIRBP-226ENST00000590171 LPXNO60711 386 aa23.25■■□□□ 1.31
CIRBP-226ENST00000590171 C22orf31O95567 290 aa23.25■■□□□ 1.31
CIRBP-226ENST00000590171 SFNP31947 248 aa23.25■■□□□ 1.31
CIRBP-226ENST00000590171 JAK3P52333 1124 aa23.25■■□□□ 1.31
CIRBP-226ENST00000590171 UGCGQ16739 394 aa23.25■■□□□ 1.31
CIRBP-226ENST00000590171 LETM2Q2VYF4 491 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms