RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 ATP4AP20648 1035 aa23.93■■□□□ 1.42
ATG4D-212ENST00000590096 PSMC5P62195 406 aa23.93■■□□□ 1.42
ATG4D-212ENST00000590096 PRKCEQ02156 737 aa23.93■■□□□ 1.42
ATG4D-212ENST00000590096 MFSD5Q6N075 450 aa23.93■■□□□ 1.42
ATG4D-212ENST00000590096 SERINC5Q86VE9 423 aa23.93■■□□□ 1.42
ATG4D-212ENST00000590096 TMEM199Q8N511 208 aa23.93■■□□□ 1.42
ATG4D-212ENST00000590096 COL1A2P08123 1366 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 UMODL1Q5DID0 1318 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 QARSP47897 775 aaKnown RBP23.92■■□□□ 1.42
ATG4D-212ENST00000590096 ADAM17P78536 824 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 FPGSQ05932 587 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 RESTQ13127 1097 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 ZNF484Q5JVG2 852 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 CHRDL2Q6WN34 429 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 C4orf32Q8N8J7 132 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 DHX38Q92620 1227 aaKnown RBP23.92■■□□□ 1.42
ATG4D-212ENST00000590096 GDF15Q99988 308 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 ZSCAN16Q9H4T2 348 aaPredicted RBP23.92■■□□□ 1.42
ATG4D-212ENST00000590096 CEP131Q9UPN4 1083 aa23.92■■□□□ 1.42
ATG4D-212ENST00000590096 POTEMA6NI47 508 aa23.91■■□□□ 1.42
ATG4D-212ENST00000590096 ZNF862O60290 1169 aa23.91■■□□□ 1.42
ATG4D-212ENST00000590096 TECP42680 631 aa23.91■■□□□ 1.42
ATG4D-212ENST00000590096 CCL23P55773 120 aa23.91■■□□□ 1.42
ATG4D-212ENST00000590096 TAF2Q6P1X5 1199 aa23.91■■□□□ 1.42
ATG4D-212ENST00000590096 TRAPPC12Q8WVT3 735 aa23.91■■□□□ 1.42
ATG4D-212ENST00000590096 MBLAC1A4D2B0 266 aaPredicted RBP23.9■■□□□ 1.42
ATG4D-212ENST00000590096 PPIGQ13427 754 aaKnown RBP eCLIP23.9■■□□□ 1.424e-6■■□□□ 13.5
ATG4D-212ENST00000590096 XKR3Q5GH77 459 aa23.9■■□□□ 1.42
ATG4D-212ENST00000590096 MARCH8Q5T0T0 291 aa23.9■■□□□ 1.42
ATG4D-212ENST00000590096 NEK9Q8TD19 979 aa23.9■■□□□ 1.42
ATG4D-212ENST00000590096 DYDC2Q96IM9 177 aa23.9■■□□□ 1.42
ATG4D-212ENST00000590096 EIF2AK1Q9BQI3 630 aaKnown RBP23.9■■□□□ 1.42
ATG4D-212ENST00000590096 LXNQ9BS40 222 aa23.9■■□□□ 1.42
ATG4D-212ENST00000590096 RAB34Q9BZG1 259 aa23.9■■□□□ 1.42
ATG4D-212ENST00000590096 UBE2OQ9C0C9 1292 aaKnown RBP23.9■■□□□ 1.42
ATG4D-212ENST00000590096 WNT8AQ9H1J5 351 aa23.9■■□□□ 1.42
ATG4D-212ENST00000590096 SEPT9Q9UHD8 586 aaPredicted RBP23.9■■□□□ 1.42
ATG4D-212ENST00000590096 BMP15O95972 392 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 CKBP12277 381 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 THPOP40225 353 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 PRPHP41219 470 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 CYP4A11Q02928 519 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 RBL2Q08999 1139 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 RSPH3Q86UC2 560 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 ERMNQ8TAM6 284 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 WNT8BQ93098 351 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 RGL1Q9NZL6 768 aa23.89■■□□□ 1.41
ATG4D-212ENST00000590096 TANC1Q9C0D5 1861 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 CAND2O75155 1236 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 RPLP2P05387 115 aaKnown RBP23.88■■□□□ 1.41
ATG4D-212ENST00000590096 CSF2RAP15509 400 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 SELPP16109 830 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 BMP8BP34820 402 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 FXR2P51116 673 aaKnown RBP eCLIP23.88■■□□□ 1.41
ATG4D-212ENST00000590096 ATP2C1P98194 919 aaPredicted RBP23.88■■□□□ 1.41
ATG4D-212ENST00000590096 CTTNQ14247 550 aaKnown RBP23.88■■□□□ 1.41
ATG4D-212ENST00000590096 TRIM71Q2Q1W2 868 aaKnown RBP23.88■■□□□ 1.41
ATG4D-212ENST00000590096 MTHFD1LQ6UB35 978 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 DTHD1Q6ZMT9 781 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 RUFY4Q6ZNE9 571 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 LRRC8DQ7L1W4 858 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 TPH2Q8IWU9 490 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 SCLYQ96I15 445 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 ZSWIM4Q9H7M6 989 aa23.88■■□□□ 1.41
ATG4D-212ENST00000590096 COLQQ9Y215 455 aaPredicted RBP23.88■■□□□ 1.41
ATG4D-212ENST00000590096 DDX11L8A8MPP1 907 aa23.87■■□□□ 1.41
ATG4D-212ENST00000590096 IQCF3P0C7M6 154 aa23.87■■□□□ 1.41
ATG4D-212ENST00000590096 KLRC1P26715 233 aa23.87■■□□□ 1.41
ATG4D-212ENST00000590096 RFC2P35250 354 aa23.87■■□□□ 1.41
ATG4D-212ENST00000590096 FXR1P51114 621 aaKnown RBP eCLIP23.87■■□□□ 1.41
ATG4D-212ENST00000590096 C4orf19Q8IY42 314 aa23.87■■□□□ 1.41
ATG4D-212ENST00000590096 LRWD1Q9UFC0 647 aa23.87■■□□□ 1.41
ATG4D-212ENST00000590096 PCDHA2Q9Y5H9 948 aa23.87■■□□□ 1.41
ATG4D-212ENST00000590096 SZT2Q5T011 3432 aa23.87■■□□□ 1.41
ATG4D-212ENST00000590096 ZBTB42B2RXF5 422 aa23.86■■□□□ 1.41
ATG4D-212ENST00000590096 SLITRK3O94933 977 aa23.86■■□□□ 1.41
ATG4D-212ENST00000590096 PARNO95453 639 aaKnown RBP23.86■■□□□ 1.41
ATG4D-212ENST00000590096 ZSCAN22P10073 491 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-212ENST00000590096 PDIA5Q14554 519 aa23.86■■□□□ 1.41
ATG4D-212ENST00000590096 SF3A1Q15459 793 aaKnown RBP23.86■■□□□ 1.41
ATG4D-212ENST00000590096 ZNF618Q5T7W0 954 aa23.86■■□□□ 1.41
ATG4D-212ENST00000590096 FOXD4L5Q5VV16 416 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-212ENST00000590096 ARL6IP4Q66PJ3 421 aaKnown RBP23.86■■□□□ 1.41
ATG4D-212ENST00000590096 HAUS3Q68CZ6 603 aa23.86■■□□□ 1.41
ATG4D-212ENST00000590096 RPUSD2Q8IZ73 545 aaKnown RBP23.86■■□□□ 1.41
ATG4D-212ENST00000590096 FOXD4L4Q8WXT5 416 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-212ENST00000590096 ZBTB10Q96DT7 871 aa23.86■■□□□ 1.41
ATG4D-212ENST00000590096 HSD17B14Q9BPX1 270 aa23.86■■□□□ 1.41
ATG4D-212ENST00000590096 NIFKQ9BYG3 293 aaKnown RBP23.86■■□□□ 1.41
ATG4D-212ENST00000590096 FAM49AQ9H0Q0 323 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-212ENST00000590096 STK24Q9Y6E0 443 aa23.86■■□□□ 1.41
ATG4D-212ENST00000590096 SMIM35A0A1B0GVV1 85 aa23.85■■□□□ 1.41
ATG4D-212ENST00000590096 MAGEB2O15479 319 aa23.85■■□□□ 1.41
ATG4D-212ENST00000590096 MTERF2Q49AM1 385 aa23.85■■□□□ 1.41
ATG4D-212ENST00000590096 FAM173BQ6P4H8 233 aa23.85■■□□□ 1.41
ATG4D-212ENST00000590096 OTUD6AQ7L8S5 288 aa23.85■■□□□ 1.41
ATG4D-212ENST00000590096 DNAJB3Q8WWF6 145 aa23.85■■□□□ 1.41
ATG4D-212ENST00000590096 TUFT1Q9NNX1 390 aa23.85■■□□□ 1.41
ATG4D-212ENST00000590096 IL23AQ9NPF7 189 aa23.85■■□□□ 1.41
ATG4D-212ENST00000590096 WRAP73Q9P2S5 460 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms