RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	BACH1	O14867	736 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	ST18	O60284	1047 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	CCNT1	O60563	726 aa	Known RBP	19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	STBD1	O95210	358 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	CTSH	P09668	335 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	RSPH10B	P0C881	870 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	GCFC2	P16383	781 aa	Known RBP	19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	SLC26A2	P50443	739 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	HMGN5	P82970	282 aa	Known RBP	19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	POTED	Q86YR6	584 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	C8orf76	Q96K31	380 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	TEKT3	Q9BXF9	490 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	TTYH1	Q9H313	450 aa	Predicted RBP	19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	TRPC6	Q9Y210	931 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	LOXHD1	Q8IVV2	1947 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	MICAL3	Q7RTP6	2002 aa		19.56	■□□□□ 0.72
MBD1-221	ENST00000589867	RRN3P2	A6NIE6	340 aa		19.55	■□□□□ 0.72
MBD1-221	ENST00000589867	KIF28P	B7ZC32	967 aa		19.55	■□□□□ 0.72
MBD1-221	ENST00000589867	CHMP2A	O43633	222 aa		19.55	■□□□□ 0.72
MBD1-221	ENST00000589867	HBP1	O60381	514 aa		19.55	■□□□□ 0.72
MBD1-221	ENST00000589867	CAND2	O75155	1236 aa		19.55	■□□□□ 0.72
MBD1-221	ENST00000589867	PSAP	P07602	524 aa		19.55	■□□□□ 0.72
MBD1-221	ENST00000589867	FAM160B1	Q5W0V3	765 aa		19.55	■□□□□ 0.72
MBD1-221	ENST00000589867	DNAJB3	Q8WWF6	145 aa		19.55	■□□□□ 0.72
MBD1-221	ENST00000589867	PBX4	Q9BYU1	374 aa		19.55	■□□□□ 0.72
MBD1-221	ENST00000589867	PARN	O95453	639 aa	Known RBP	19.54	■□□□□ 0.72
MBD1-221	ENST00000589867	SPIRE1	Q08AE8	756 aa		19.54	■□□□□ 0.72
MBD1-221	ENST00000589867	TAF2	Q6P1X5	1199 aa		19.54	■□□□□ 0.72
MBD1-221	ENST00000589867	MTHFD1L	Q6UB35	978 aa		19.54	■□□□□ 0.72
MBD1-221	ENST00000589867	IL27	Q8NEV9	243 aa		19.54	■□□□□ 0.72
MBD1-221	ENST00000589867	FTO	Q9C0B1	505 aa	Known RBP eCLIP	19.54	■□□□□ 0.72
MBD1-221	ENST00000589867	BRMS1	Q9HCU9	246 aa		19.54	■□□□□ 0.72
MBD1-221	ENST00000589867	MTMR10	Q9NXD2	777 aa		19.54	■□□□□ 0.72
MBD1-221	ENST00000589867	PCDHA2	Q9Y5H9	948 aa		19.54	■□□□□ 0.72
MBD1-221	ENST00000589867	SFN	P31947	248 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	JAK3	P52333	1124 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	PPP2R5C	Q13362	524 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	TRIM29	Q14134	588 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	PLEKHG4	Q58EX7	1191 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	CNKSR3	Q6P9H4	555 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	DEFB123	Q8N688	67 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	DBF4B	Q8NFT6	615 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	RDM1	Q8NG50	284 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	FAM20A	Q96MK3	541 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	CEP89	Q96ST8	783 aa		19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	YBX2	Q9Y2T7	364 aa	Known RBP	19.53	■□□□□ 0.72
MBD1-221	ENST00000589867	TBX3	O15119	743 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	C22orf31	O95567	290 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	DNAJB2	P25686	324 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	KLRC1	P26715	233 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	RABGGTB	P53611	331 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	WDR5	P61964	334 aa	Known RBP	19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	MIER3	Q7Z3K6	550 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	LINC01465	Q8N7H1	131 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	BBX	Q8WY36	941 aa	Predicted RBP	19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	GUCD1	Q96NT3	240 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	MTMR9	Q96QG7	549 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	FAM49A	Q9H0Q0	323 aa	Predicted RBP	19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	TMEM60	Q9H2L4	133 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	WRAP73	Q9P2S5	460 aa	Predicted RBP	19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	SAMM50	Q9Y512	469 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	SLC4A7	Q9Y6M7	1214 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	COL1A2	P08123	1366 aa		19.52	■□□□□ 0.72
MBD1-221	ENST00000589867	SMIM35	A0A1B0GVV1	85 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	TMEM150B	A6NC51	233 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	ZBBX	A8MT70	800 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	BAIAP3	O94812	1187 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	MYOG	P15173	224 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	MCM2	P49736	904 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	DEFB103A	P81534	67 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	PRKCE	Q02156	737 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	TARBP2	Q15633	366 aa	Known RBP	19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	ZNF484	Q5JVG2	852 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	TRMT1L	Q7Z2T5	733 aa	Known RBP	19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	TMCO2	Q7Z6W1	182 aa	Predicted RBP	19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	KIAA0319L	Q8IZA0	1049 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	FOXP1	Q9H334	677 aa	Predicted RBP	19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	SEMA6B	Q9H3T3	888 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	CDY2A	Q9Y6F7	541 aa		19.51	■□□□□ 0.71
MBD1-221	ENST00000589867	OAT	P04181	439 aa		19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	ACTN1	P12814	892 aa		19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	ATP2A2	P16615	1042 aa	Known RBP	19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	MRPS6	P82932	125 aa	Known RBP	19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	LPIN1	Q14693	890 aa		19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	FAM184A	Q8NB25	1140 aa		19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	FAM161B	Q96MY7	647 aa		19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	NAP1L4	Q99733	375 aa	Known RBP	19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	MTIF3	Q9H2K0	278 aa	Known RBP	19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	AGO3	Q9H9G7	860 aa	Known RBP	19.5	■□□□□ 0.71
MBD1-221	ENST00000589867	ARHGEF15	O94989	841 aa		19.49	■□□□□ 0.71
MBD1-221	ENST00000589867	U2AF2	P26368	475 aa	Known RBP eCLIP	19.49	■□□□□ 0.71
MBD1-221	ENST00000589867	TOB1	P50616	345 aa	Predicted RBP	19.49	■□□□□ 0.71
MBD1-221	ENST00000589867	TMEM62	Q0P6H9	643 aa		19.49	■□□□□ 0.71
MBD1-221	ENST00000589867	CUL4A	Q13619	759 aa		19.49	■□□□□ 0.71
MBD1-221	ENST00000589867	FBXO47	Q5MNV8	452 aa		19.49	■□□□□ 0.71
MBD1-221	ENST00000589867	CKAP2L	Q8IYA6	745 aa		19.49	■□□□□ 0.71
MBD1-221	ENST00000589867	BANK1	Q8NDB2	785 aa		19.49	■□□□□ 0.71
MBD1-221	ENST00000589867	TNPO1	Q92973	898 aa	Known RBP	19.49	■□□□□ 0.71
MBD1-221	ENST00000589867	CDHR5	Q9HBB8	845 aa		19.49	■□□□□ 0.71

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