RNA–Protein interactions for RNA: ENST00000589536.5

GRN-215, Transcript of granulin precursor, human

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-215	ENST00000589536	EPC2	Q52LR7	807 aa		27.81	■■■□□ 2.04
GRN-215	ENST00000589536	RUFY3	Q7L099	469 aa		27.81	■■■□□ 2.04
GRN-215	ENST00000589536	CCDC60	Q8IWA6	550 aa	Predicted RBP	27.81	■■■□□ 2.04
GRN-215	ENST00000589536	HLA-C	Q95604	372 aa		27.81	■■■□□ 2.04
GRN-215	ENST00000589536	NCOA5	Q9HCD5	579 aa	Known RBP	27.81	■■■□□ 2.04
GRN-215	ENST00000589536	ZSWIM6	Q9HCJ5	1215 aa		27.81	■■■□□ 2.04
GRN-215	ENST00000589536	SET	Q01105	290 aa	Predicted RBP	27.8	■■■□□ 2.04
GRN-215	ENST00000589536	AKAP17A	Q02040	695 aa	Known RBP	27.8	■■■□□ 2.04
GRN-215	ENST00000589536	TOB2	Q14106	344 aa	Predicted RBP	27.8	■■■□□ 2.04
GRN-215	ENST00000589536	IER5	Q5VY09	327 aa		27.8	■■■□□ 2.04
GRN-215	ENST00000589536	RASGRP4	Q8TDF6	673 aa		27.8	■■■□□ 2.04
GRN-215	ENST00000589536	SLC26A6	Q9BXS9	759 aa		27.8	■■■□□ 2.04
GRN-215	ENST00000589536	TRPV2	Q9Y5S1	764 aa		27.8	■■■□□ 2.04
GRN-215	ENST00000589536	SQOR	Q9Y6N5	450 aa		27.8	■■■□□ 2.04
GRN-215	ENST00000589536	SMIM35	A0A1B0GVV1	85 aa		27.79	■■■□□ 2.04
GRN-215	ENST00000589536	ENPP3	O14638	875 aa		27.79	■■■□□ 2.04
GRN-215	ENST00000589536	BACH1	O14867	736 aa		27.79	■■■□□ 2.04
GRN-215	ENST00000589536	CCT2	P78371	535 aa	Known RBP	27.79	■■■□□ 2.04
GRN-215	ENST00000589536	FAM160B1	Q5W0V3	765 aa		27.79	■■■□□ 2.04
GRN-215	ENST00000589536	MTHFD1L	Q6UB35	978 aa		27.79	■■■□□ 2.04
GRN-215	ENST00000589536	ATP8B4	Q8TF62	1192 aa		27.79	■■■□□ 2.04
GRN-215	ENST00000589536	LINC01599	Q8WXQ3	324 aa		27.79	■■■□□ 2.04
GRN-215	ENST00000589536	UIMC1	Q96RL1	719 aa		27.79	■■■□□ 2.04
GRN-215	ENST00000589536	ZNF577	Q9BSK1	485 aa		27.79	■■■□□ 2.04
GRN-215	ENST00000589536	RC3H2	Q9HBD1	1191 aa	Known RBP	27.79	■■■□□ 2.04
GRN-215	ENST00000589536	CD52	P31358	61 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	CIITA	P33076	1130 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	TMEM62	Q0P6H9	643 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	MIS18BP1	Q6P0N0	1132 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	CCDC148	Q8NFR7	591 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	BICD2	Q8TD16	824 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	LENG9	Q96B70	501 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	IL17RA	Q96F46	866 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	NECAB3	Q96P71	396 aa	Predicted RBP	27.78	■■■□□ 2.04
GRN-215	ENST00000589536	ZNF302	Q9NR11	478 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	VPS54	Q9P1Q0	977 aa		27.78	■■■□□ 2.04
GRN-215	ENST00000589536	TCF20	Q9UGU0	1960 aa	Known RBP	27.77	■■■□□ 2.04
GRN-215	ENST00000589536	RALGAPA2	Q2PPJ7	1873 aa		27.77	■■■□□ 2.04
GRN-215	ENST00000589536	NLRC5	Q86WI3	1866 aa		27.77	■■■□□ 2.04
GRN-215	ENST00000589536	IGSF9B	Q9UPX0	1349 aa		27.77	■■■□□ 2.04
GRN-215	ENST00000589536	KDM3A	Q9Y4C1	1321 aa		27.77	■■■□□ 2.04
GRN-215	ENST00000589536	HBP1	O60381	514 aa		27.77	■■■□□ 2.04
GRN-215	ENST00000589536	LINC00271	P0C7V0	271 aa		27.77	■■■□□ 2.04
GRN-215	ENST00000589536	TMEM192	Q8IY95	271 aa		27.77	■■■□□ 2.04
GRN-215	ENST00000589536	MRPL38	Q96DV4	380 aa	Known RBP	27.77	■■■□□ 2.04
GRN-215	ENST00000589536	TBC1D22B	Q9NU19	505 aa		27.77	■■■□□ 2.04
GRN-215	ENST00000589536	COL1A2	P08123	1366 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	ADGRA3	Q8IWK6	1321 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	TTC3	P53804	2025 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	ZBTB42	B2RXF5	422 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536		H3BNC9	293 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536		M0QZ92	97 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	EDIL3	O43854	480 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	ATP4A	P20648	1035 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	ZNF746	Q6NUN9	644 aa	Predicted RBP	27.76	■■■□□ 2.03
GRN-215	ENST00000589536	SWSAP1	Q6NVH7	229 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	PDXDC2P	Q6P474	469 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	NME8	Q8N427	588 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	CELF4	Q9BZC1	486 aa	Known RBP	27.76	■■■□□ 2.03
GRN-215	ENST00000589536	CYP46A1	Q9Y6A2	500 aa		27.76	■■■□□ 2.03
GRN-215	ENST00000589536	NCOR1	O75376	2440 aa		27.75	■■■□□ 2.03
GRN-215	ENST00000589536	KLRC1	P26715	233 aa		27.75	■■■□□ 2.03
GRN-215	ENST00000589536	PRR16	Q569H4	304 aa		27.75	■■■□□ 2.03
GRN-215	ENST00000589536	TM6SF1	Q9BZW5	370 aa		27.75	■■■□□ 2.03
GRN-215	ENST00000589536	SH3GLB2	Q9NR46	395 aa		27.75	■■■□□ 2.03
GRN-215	ENST00000589536	PADI3	Q9ULW8	664 aa		27.75	■■■□□ 2.03
GRN-215	ENST00000589536	MAFB	Q9Y5Q3	323 aa	Predicted RBP	27.75	■■■□□ 2.03
GRN-215	ENST00000589536	GPM6B	Q13491	265 aa		27.74	■■■□□ 2.03
GRN-215	ENST00000589536	RTN4RL1	Q86UN2	441 aa	Predicted RBP	27.74	■■■□□ 2.03
GRN-215	ENST00000589536	SMAP1	Q8IYB5	467 aa	Predicted RBP	27.74	■■■□□ 2.03
GRN-215	ENST00000589536	CRIPAK	Q8N1N5	446 aa		27.74	■■■□□ 2.03
GRN-215	ENST00000589536	FIBCD1	Q8N539	461 aa		27.74	■■■□□ 2.03
GRN-215	ENST00000589536	ZNF689	Q96CS4	500 aa	Predicted RBP	27.74	■■■□□ 2.03
GRN-215	ENST00000589536	FTHL17	Q9BXU8	183 aa		27.74	■■■□□ 2.03
GRN-215	ENST00000589536	BRWD1	Q9NSI6	2320 aa		27.74	■■■□□ 2.03
GRN-215	ENST00000589536	KRT76	Q01546	638 aa		27.73	■■■□□ 2.03
GRN-215	ENST00000589536	PTPRO	Q16827	1216 aa		27.73	■■■□□ 2.03
GRN-215	ENST00000589536	ZNF484	Q5JVG2	852 aa		27.73	■■■□□ 2.03
GRN-215	ENST00000589536	KIAA0319L	Q8IZA0	1049 aa		27.73	■■■□□ 2.03
GRN-215	ENST00000589536	ZNF274	Q96GC6	653 aa	Predicted RBP	27.73	■■■□□ 2.03
GRN-215	ENST00000589536	UPF3B	Q9BZI7	483 aa	Known RBP	27.73	■■■□□ 2.03
GRN-215	ENST00000589536	LOXHD1	Q8IVV2	1947 aa		27.73	■■■□□ 2.03
GRN-215	ENST00000589536	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	27.72	■■■□□ 2.03
GRN-215	ENST00000589536	C5orf67	F2Z3F1	127 aa		27.72	■■■□□ 2.03
GRN-215	ENST00000589536	DGKI	O75912	1065 aa		27.72	■■■□□ 2.03
GRN-215	ENST00000589536	PAK2	Q13177	524 aa		27.72	■■■□□ 2.03
GRN-215	ENST00000589536	TRIM22	Q8IYM9	498 aa		27.72	■■■□□ 2.03
GRN-215	ENST00000589536	CLP1	Q92989	425 aa	Known RBP	27.72	■■■□□ 2.03
GRN-215	ENST00000589536	TMX1	Q9H3N1	280 aa		27.72	■■■□□ 2.03
GRN-215	ENST00000589536	UBE2Z	Q9H832	354 aa	Predicted RBP	27.72	■■■□□ 2.03
GRN-215	ENST00000589536	PCDHA10	Q9Y5I2	948 aa		27.72	■■■□□ 2.03
GRN-215	ENST00000589536	BDP1	A6H8Y1	2624 aa		27.71	■■■□□ 2.03
GRN-215	ENST00000589536	C22orf31	O95567	290 aa		27.71	■■■□□ 2.03
GRN-215	ENST00000589536	CTNNB1	P35222	781 aa		27.71	■■■□□ 2.03
GRN-215	ENST00000589536	TIGD5	Q53EQ6	642 aa		27.71	■■■□□ 2.03
GRN-215	ENST00000589536	BBX	Q8WY36	941 aa	Predicted RBP	27.71	■■■□□ 2.03
GRN-215	ENST00000589536	LARP6	Q9BRS8	491 aa	Known RBP	27.71	■■■□□ 2.03
GRN-215	ENST00000589536	PSAP	P07602	524 aa		27.7	■■■□□ 2.02
GRN-215	ENST00000589536	USP11	P51784	963 aa		27.7	■■■□□ 2.02
GRN-215	ENST00000589536	NLRP5	P59047	1200 aa		27.7	■■■□□ 2.02

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