RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	CCNE2	O96020	404 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	CASQ1	P31415	396 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	FSTL1	Q12841	308 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	ARID5B	Q14865	1188 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	NR1I3	Q14994	352 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	ANKRD40	Q6AI12	368 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	TMC6	Q7Z403	805 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	NCAPG2	Q86XI2	1143 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	VSTM4	Q8IW00	320 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	CCDC150	Q8NCX0	1101 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	BANK1	Q8NDB2	785 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	GOLGA5	Q8TBA6	731 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	NMRK2	Q9NPI5	230 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	ADD3	Q9UEY8	706 aa	Known RBP	17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	17.04	■□□□□ 0.32	7e-8	■■□□□ 13.5
DDX39A-209	ENST00000589318	MAFG	O15525	162 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	KCNA2	P16389	499 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	ERCC3	P19447	782 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	OSBP	P22059	807 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	PTPN21	Q16825	1174 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	FAM26F	Q5R3K3	315 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	RINT1	Q6NUQ1	792 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	CCDC65	Q8IXS2	484 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	IWS1	Q96ST2	819 aa		17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	LIMA1	Q9UHB6	759 aa	Known RBP	17.04	■□□□□ 0.32
DDX39A-209	ENST00000589318	ZNFX1	Q9P2E3	1918 aa	Known RBP	17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	TRPM7	Q96QT4	1865 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	STAM2	O75886	525 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	NOP2	P46087	812 aa	Known RBP	17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	KRT31	Q15323	416 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	TCP11X2	Q5H9J9	407 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	C1orf186	Q6ZWK4	172 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	NLRX1	Q86UT6	975 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	FAM133A	Q8N9E0	248 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	TRIM47	Q96LD4	638 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	NACC1	Q96RE7	527 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	RSPH14	Q9UHP6	348 aa		17.03	■□□□□ 0.32
DDX39A-209	ENST00000589318	PHLPP2	Q6ZVD8	1323 aa		17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	SOWAHB	A6NEL2	793 aa		17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	CELF2	O95319	508 aa	Known RBP	17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	SLC25A27	O95847	323 aa		17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	P4HB	P07237	508 aa	Known RBP	17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	ALDH5A1	P51649	535 aa	Predicted RBP	17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	LRRC41	Q15345	812 aa		17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	UBXN4	Q92575	508 aa		17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	EXOC4	Q96A65	974 aa		17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	THAP9	Q9H5L6	903 aa		17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	BCAS3	Q9H6U6	928 aa		17.02	■□□□□ 0.32
DDX39A-209	ENST00000589318	BICDL2	A1A5D9	508 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	USP27X	A6NNY8	438 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	RSPH10B2	B2RC85	870 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	KCNJ18	B7U540	433 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	TEX33	O43247	280 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	RSPH10B	P0C881	870 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	CYP2C8	P10632	490 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	EDNRB	P24530	442 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	KRT76	Q01546	638 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	KCNJ12	Q14500	433 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	ERCC6L	Q2NKX8	1250 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	HERC4	Q5GLZ8	1057 aa	Predicted RBP	17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	ST7	Q9NRC1	585 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	TBC1D7	Q9P0N9	293 aa		17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	17.02	■□□□□ 0.31
DDX39A-209	ENST00000589318	MYH11	P35749	1972 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	SPATA31C2	B4DYI2	1134 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	LYPLA2	O95372	231 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	KRT18	P05783	430 aa	Known RBP	17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	IVL	P07476	585 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	PBX1	P40424	430 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	SPAG1	Q07617	926 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	ZSCAN26	Q16670	478 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	UGCG	Q16739	394 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	ZCWPW2	Q504Y3	356 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	ARHGAP29	Q52LW3	1261 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	CST9	Q5W186	159 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	CSGALNACT2	Q8N6G5	542 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	BRI3BP	Q8WY22	251 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	FGD4	Q96M96	766 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	CTAGE1	Q96RT6	745 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	SENP7	Q9BQF6	1050 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	ZSWIM4	Q9H7M6	989 aa		17.01	■□□□□ 0.31
DDX39A-209	ENST00000589318	NFASC	O94856	1347 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	EFCAB8	A8MWE9	144 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	WDR64	B1ANS9	1081 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	BTBD19	C9JJ37	291 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	POTEB2	H3BUK9	544 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	MYO1C	O00159	1063 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	ITGBL1	O95965	494 aa	Predicted RBP	17	■□□□□ 0.31
DDX39A-209	ENST00000589318	CETP	P11597	493 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	STXBP2	Q15833	593 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	ARMCX5	Q6P1M9	558 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	FOXR2	Q6PJQ5	311 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	SFR1	Q86XK3	245 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	MYOCD	Q8IZQ8	938 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	C2orf69	Q8N8R5	385 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	SLC45A1	Q9Y2W3	748 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	TELO2	Q9Y4R8	837 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	EIF3J	O75822	258 aa	Known RBP	17	■□□□□ 0.31
DDX39A-209	ENST00000589318	SFN	P31947	248 aa		17	■□□□□ 0.31
DDX39A-209	ENST00000589318	ICAM3	P32942	547 aa		17	■□□□□ 0.31

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms