RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 CEP55Q53EZ4 464 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 CREB3L3Q68CJ9 461 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 HEATR3Q7Z4Q2 680 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 CCDC82Q8N4S0 544 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 LINC01599Q8WXQ3 324 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 FAM49AQ9H0Q0 323 aaPredicted RBP15.98■□□□□ 0.15
VMP1-209ENST00000588915 PKD2L1Q9P0L9 805 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 TRPC6Q9Y210 931 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 MUC6Q6W4X9 2439 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 PIEZO1Q92508 2521 aa15.98■□□□□ 0.15
VMP1-209ENST00000588915 MEIS1O00470 390 aa15.97■□□□□ 0.15
VMP1-209ENST00000588915 EYA4O95677 639 aa15.97■□□□□ 0.15
VMP1-209ENST00000588915 IRS1P35568 1242 aa15.97■□□□□ 0.15
VMP1-209ENST00000588915 DLX2Q07687 328 aaPredicted RBP15.97■□□□□ 0.15
VMP1-209ENST00000588915 PAK2Q13177 524 aa15.97■□□□□ 0.15
VMP1-209ENST00000588915 CAMK1Q14012 370 aa15.97■□□□□ 0.15
VMP1-209ENST00000588915 ODR4Q5SWX8 454 aa15.97■□□□□ 0.15
VMP1-209ENST00000588915 NIPA1Q7RTP0 329 aa15.97■□□□□ 0.15
VMP1-209ENST00000588915 SPPL3Q8TCT6 385 aa15.97■□□□□ 0.15
VMP1-209ENST00000588915 ESYT1Q9BSJ8 1104 aa15.97■□□□□ 0.15
VMP1-209ENST00000588915 ALG13Q9NP73 1137 aaKnown RBP15.97■□□□□ 0.15
VMP1-209ENST00000588915 IGKV6D-21A0A0A0MT36 114 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 hCG_1642624A0A1W2PR95 340 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 HBP1O60381 514 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 SCG2P13521 617 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 NAPAP54920 295 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 KRT76Q01546 638 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 AP3B2Q13367 1082 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 RNF20Q5VTR2 975 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 WWC2Q6AWC2 1192 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 MTHFD1LQ6UB35 978 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 MICU3Q86XE3 530 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 CYP2W1Q8TAV3 490 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 AGO4Q9HCK5 861 aaKnown RBP15.96■□□□□ 0.15
VMP1-209ENST00000588915 CD207Q9UJ71 328 aa15.96■□□□□ 0.15
VMP1-209ENST00000588915 MRPL42Q9Y6G3 142 aaKnown RBP15.96■□□□□ 0.15
VMP1-209ENST00000588915 ITGB1P05556 798 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 ARP10275 920 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 SREBF1P36956 1147 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 UBE3AQ05086 875 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 FUT2Q10981 343 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 COL9A3Q14050 684 aaPredicted RBP15.95■□□□□ 0.14
VMP1-209ENST00000588915 HERC4Q5GLZ8 1057 aaPredicted RBP15.95■□□□□ 0.14
VMP1-209ENST00000588915 FAM160B1Q5W0V3 765 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 APOA5Q6Q788 366 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 EFHBQ8N7U6 833 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 KLHL23Q8NBE8 558 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 MSLNLQ96KJ4 702 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 UIMC1Q96RL1 719 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 ANO3Q9BYT9 981 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 IGFLR1Q9H665 355 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 LRFN2Q9ULH4 789 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 COL1A2P08123 1366 aa15.95■□□□□ 0.14
VMP1-209ENST00000588915 CNTNAP5Q8WYK1 1306 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 FSD2A1L4K1 749 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 SMCO2A6NFE2 343 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 TBX10O75333 385 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 SARSP49591 514 aaKnown RBP15.94■□□□□ 0.14
VMP1-209ENST00000588915 RCAN1P53805 252 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 EXOSC10Q01780 885 aaKnown RBP15.94■□□□□ 0.14
VMP1-209ENST00000588915 TMEM62Q0P6H9 643 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 ITGB3BPQ13352 177 aaPredicted RBP15.94■□□□□ 0.14
VMP1-209ENST00000588915 ZNF484Q5JVG2 852 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 ABHD15Q6UXT9 468 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 ATP8B4Q8TF62 1192 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 POF1BQ8WVV4 589 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 NEK1Q96PY6 1258 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 LRRC2Q9BYS8 371 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 TMX1Q9H3N1 280 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 AAASQ9NRG9 546 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 C1orf112Q9NSG2 853 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 BARHL2Q9NY43 387 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 PCDHB7Q9Y5E2 793 aa15.94■□□□□ 0.14
VMP1-209ENST00000588915 STXBP3O00186 592 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 RPS6KA5O75582 802 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 DNAJB1P25685 340 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 KLRC1P26715 233 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 ZNF76P36508 570 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 CLK2P49760 499 aaKnown RBP15.93■□□□□ 0.14
VMP1-209ENST00000588915 NDUFV1P49821 464 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 ADCY7P51828 1080 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 COASYQ13057 564 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 TSGA10IPQ3SY00 556 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 MCTP2Q6DN12 878 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 TYW1BQ6NUM6 668 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 DHX32Q7L7V1 743 aaKnown RBP15.93■□□□□ 0.14
VMP1-209ENST00000588915 RAB11FIP4Q86YS3 637 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 TRAPPC12Q8WVT3 735 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 ZBTB10Q96DT7 871 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 MFSD14AQ96MC6 490 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 ANO2Q9NQ90 1003 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 RGS18Q9NS28 235 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 PCDHB12Q9Y5F1 795 aa15.93■□□□□ 0.14
VMP1-209ENST00000588915 V9GY48 417 aaPredicted RBP15.93■□□□□ 0.14
VMP1-209ENST00000588915 ATG2AQ2TAZ0 1938 aa15.92■□□□□ 0.14
VMP1-209ENST00000588915 GPR182O15218 404 aa15.92■□□□□ 0.14
VMP1-209ENST00000588915 LINC01565O15544 149 aa15.92■□□□□ 0.14
VMP1-209ENST00000588915 ZBTB43O43298 467 aa15.92■□□□□ 0.14
VMP1-209ENST00000588915 CYP3A4P08684 503 aa15.92■□□□□ 0.14
VMP1-209ENST00000588915 GTF2F1P35269 517 aaKnown RBP eCLIP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms