RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 JAK2O60674 1132 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 TDP2O95551 362 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 MMP1P03956 469 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 PSAPP07602 524 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 SFNP31947 248 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 PBX2P40425 430 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 JAK3P52333 1124 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 RABEP1Q15276 862 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 INF2Q27J81 1249 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 SWSAP1Q6NVH7 229 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 FAM43BQ6ZT52 329 aaPredicted RBP11.87□□□□□ -0.51
TPM4-209ENST00000588483 NEK8Q86SG6 692 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 RSPH3Q86UC2 560 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
TPM4-209ENST00000588483 APBB2Q92870 758 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 CDX2Q99626 313 aaPredicted RBP11.87□□□□□ -0.51
TPM4-209ENST00000588483 KCNMB3Q9NPA1 279 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 TCEAL9Q9UHQ7 104 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 TRPC6Q9Y210 931 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 YBX2Q9Y2T7 364 aaKnown RBP11.87□□□□□ -0.51
TPM4-209ENST00000588483 SQORQ9Y6N5 450 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 COL4A6Q14031 1691 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 KDM3AQ9Y4C1 1321 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 SMIM35A0A1B0GVV1 85 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 GAS7O60861 476 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 CHRNA1P02708 482 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 KRT2P35908 639 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 IKBKEQ14164 716 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 ZNF484Q5JVG2 852 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 LRCH2Q5VUJ6 765 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 PDXDC2PQ6P474 469 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 HERC6Q8IVU3 1022 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 NME8Q8N427 588 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 DBF4BQ8NFT6 615 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 FAM167AQ96KS9 214 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 FAM20AQ96MK3 541 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 TEKT3Q9BXF9 490 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 BRMS1Q9HCU9 246 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 DISC1Q9NRI5 854 aa11.86□□□□□ -0.51
TPM4-209ENST00000588483 DDX25Q9UHL0 483 aaKnown RBP11.86□□□□□ -0.51
TPM4-209ENST00000588483 SLC37A4O43826 429 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 GJB5O95377 273 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 CTSHP09668 335 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 KCNJ6P48051 423 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 HMGN5P82970 282 aaKnown RBP11.85□□□□□ -0.51
TPM4-209ENST00000588483 NR5A1Q13285 461 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 PPP2R5CQ13362 524 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 GRIN2CQ14957 1233 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 LETM2Q2VYF4 491 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 EARS2Q5JPH6 523 aaKnown RBP11.85□□□□□ -0.51
TPM4-209ENST00000588483 KRT40Q6A162 431 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 MTHFD1LQ6UB35 978 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 PIK3AP1Q6ZUJ8 805 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 USP38Q8NB14 1042 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 DNAJB3Q8WWF6 145 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 SEPT8Q92599 483 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 OSBPL7Q9BZF2 842 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 UNC45AQ9H3U1 944 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 CEP131Q9UPN4 1083 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 EVPLQ92817 2033 aa11.85□□□□□ -0.51
TPM4-209ENST00000588483 ZNF862O60290 1169 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 DTNBO60941 627 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 C22orf31O95567 290 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 KLRC1P26715 233 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 RABGGTBP53611 331 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 IGBP1P78318 339 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 DEFB103AP81534 67 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 MRPS6P82932 125 aaKnown RBP11.84□□□□□ -0.51
TPM4-209ENST00000588483 LPIN1Q14693 890 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 FBXO47Q5MNV8 452 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 IER5Q5VY09 327 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 TSHZ1Q6ZSZ6 1077 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 DIS3L2Q8IYB7 885 aaKnown RBP11.84□□□□□ -0.51
TPM4-209ENST00000588483 LINC01465Q8N7H1 131 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 TRAPPC12Q8WVT3 735 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 HAS1Q92839 578 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 FAM161BQ96MY7 647 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 TBC1D32Q96NH3 1257 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 IFIH1Q9BYX4 1025 aaKnown RBP11.84□□□□□ -0.51
TPM4-209ENST00000588483 NKX2-4Q9H2Z4 354 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 SLC28A3Q9HAS3 691 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 UPF2Q9HAU5 1272 aaKnown RBP11.84□□□□□ -0.51
TPM4-209ENST00000588483 GABBR1Q9UBS5 961 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 VAV3Q9UKW4 847 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
TPM4-209ENST00000588483 TTC3P53804 2025 aa11.83□□□□□ -0.52
TPM4-209ENST00000588483 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.83□□□□□ -0.52
TPM4-209ENST00000588483 BTBD18B2RXH4 712 aa11.83□□□□□ -0.52
TPM4-209ENST00000588483 KIF28PB7ZC32 967 aa11.83□□□□□ -0.52
TPM4-209ENST00000588483 ST18O60284 1047 aa11.83□□□□□ -0.52
TPM4-209ENST00000588483 CCNT1O60563 726 aaKnown RBP11.83□□□□□ -0.52
TPM4-209ENST00000588483 OATP04181 439 aa11.83□□□□□ -0.52
TPM4-209ENST00000588483 CA3P07451 260 aa11.83□□□□□ -0.52
TPM4-209ENST00000588483 HTRA4P83105 476 aaPredicted RBP11.83□□□□□ -0.52
TPM4-209ENST00000588483 PRKCEQ02156 737 aa11.83□□□□□ -0.52
TPM4-209ENST00000588483 SPIRE1Q08AE8 756 aa11.83□□□□□ -0.52
TPM4-209ENST00000588483 TRIM29Q14134 588 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms