RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.12
CLPTM1-208ENST00000588274 PADI3Q9ULW8 664 aa15.83■□□□□ 0.12
CLPTM1-208ENST00000588274 PCDHA2Q9Y5H9 948 aa15.83■□□□□ 0.12
CLPTM1-208ENST00000588274 TRPV2Q9Y5S1 764 aa15.83■□□□□ 0.12
CLPTM1-208ENST00000588274 FNDC1Q4ZHG4 1894 aaPredicted RBP15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 TMEM62Q0P6H9 643 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 NAALADL2Q58DX5 795 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 PRSS33Q8NF86 280 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 TMEM40Q8WWA1 233 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 RUFY2Q8WXA3 655 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 EDAQ92838 391 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 PHOX2BQ99453 314 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 LZTS2Q9BRK4 669 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 IGFLR1Q9H665 355 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 KCNH7Q9NS40 1196 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 HCSTQ9UBK5 93 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 PCDHA6Q9UN73 950 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 PCDHA8Q9Y5H6 950 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 CFAP54Q96N23 3096 aa15.82■□□□□ 0.12
CLPTM1-208ENST00000588274 IGKV6D-21A0A0A0MT36 114 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 RRN3P2A6NIE6 340 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 STXBP3O00186 592 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 NFASCO94856 1347 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 SCG2P13521 617 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 LIFRP42702 1097 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 ACTR2P61160 394 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 RBM10P98175 930 aaKnown RBP15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 FUT2Q10981 343 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 PAN2Q504Q3 1202 aaKnown RBP15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 BMP8AQ7Z5Y6 402 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 RAB11FIP4Q86YS3 637 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 POF1BQ8WVV4 589 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 CNTNAP5Q8WYK1 1306 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 FTHL17Q9BXU8 183 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 UPF3BQ9BZI7 483 aaKnown RBP15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 LSG1Q9H089 658 aaKnown RBP15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 ERVK-5Q9HDB9 667 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 SLC9A2Q9UBY0 812 aa15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 BARX2Q9UMQ3 279 aaPredicted RBP15.81■□□□□ 0.12
CLPTM1-208ENST00000588274 SMIM35A0A1B0GVV1 85 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 ZBTB42B2RXF5 422 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 MAFGO15525 162 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 ATG7O95352 703 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 CCNE2O96020 404 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 RPLP2P05387 115 aaKnown RBP15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 ARP10275 920 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 NRIP1P48552 1158 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 NDUFV1P49821 464 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 GNAQP50148 359 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 IER5Q5VY09 327 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 WWC2Q6AWC2 1192 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 PLPPR4Q7Z2D5 763 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 ATP8B4Q8TF62 1192 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 MXRA8Q9BRK3 442 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 CELF4Q9BZC1 486 aaKnown RBP15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 CDHR5Q9HBB8 845 aa15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 USP15Q9Y4E8 981 aaPredicted RBP15.8■□□□□ 0.12
CLPTM1-208ENST00000588274 ZDBF2Q9HCK1 2354 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 PAK2Q13177 524 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 KCNC3Q14003 757 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 TMEM266Q2M3C6 531 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 IER5LQ5T953 404 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 MTHFD1LQ6UB35 978 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 SGMS1Q86VZ5 419 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 SUSD6Q92537 303 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 PGBD1Q96JS3 809 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 TMEM87BQ96K49 555 aa15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 AGO4Q9HCK5 861 aaKnown RBP15.79■□□□□ 0.12
CLPTM1-208ENST00000588274 SPDYE3A6NKU9 549 aa15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 FSCN2O14926 492 aa15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 SLC27A2O14975 620 aa15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 MCM5P33992 734 aa15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 SARSP49591 514 aaKnown RBP15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 CLK2P49760 499 aaKnown RBP15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 TRIM67Q6ZTA4 783 aa15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 CRYGNQ8WXF5 182 aa15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 TRPC6Q9Y210 931 aa15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 NOC2LQ9Y3T9 749 aaKnown RBP15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 DMDP11532 3685 aa15.78■□□□□ 0.12
CLPTM1-208ENST00000588274 TMEM221A6NGB7 291 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 C9IYK1 514 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 M0R296 226 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 MEIS1O00470 390 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 DHX15O43143 795 aaKnown RBP15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 CALM1P0DP23 149 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 CALM2P0DP24 149 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 CALM3P0DP25 149 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 ATP4AP20648 1035 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 STAT5BP51692 787 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 KRT76Q01546 638 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 TCF15Q12870 199 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 NECTIN1Q15223 517 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 CEP55Q53EZ4 464 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 CASC1Q6TDU7 716 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 ABHD15Q6UXT9 468 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 HEATR3Q7Z4Q2 680 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 RBM23Q86U06 439 aaKnown RBP15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 CCDC60Q8IWA6 550 aaPredicted RBP15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 KIAA0319LQ8IZA0 1049 aa15.77■□□□□ 0.12
CLPTM1-208ENST00000588274 CCDC82Q8N4S0 544 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms