RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 USP49Q70CQ1 688 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 PPFIBP1Q86W92 1011 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 ERO1BQ86YB8 467 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 SIAH1Q8IUQ4 282 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 SCYL3Q8IZE3 742 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 ZNF295-AS1Q8N0V1 137 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 C4orf32Q8N8J7 132 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 SHISA4Q96DD7 197 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 GMCL1Q96IK5 515 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 EPSTI1Q96J88 318 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 PURBQ96QR8 312 aaKnown RBP6.43□□□□□ -1.38
SDF2-206ENST00000587788 SRRTQ9BXP5 876 aaKnown RBP6.43□□□□□ -1.38
SDF2-206ENST00000587788 RAB34Q9BZG1 259 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 CCSER1Q9C0I3 900 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 LRRC27Q9C0I9 530 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 RIOX1Q9H6W3 641 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 AS3MTQ9HBK9 375 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 PRDM10Q9NQV6 1147 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 SAGE1Q9NXZ1 904 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 EGFL7Q9UHF1 273 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 PNMA2Q9UL42 364 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 PCDHA6Q9UN73 950 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 TMX2Q9Y320 296 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 PCDHA8Q9Y5H6 950 aa6.43□□□□□ -1.38
SDF2-206ENST00000587788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.43□□□□□ -1.38
SDF2-206ENST00000587788 PNMA6FA0A0J9YX94 578 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 hCG_1642624A0A1W2PR95 340 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 SOWAHDA6NJG2 315 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 BTBD19C9JJ37 291 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 AKR1B15C9JRZ8 316 aaPredicted RBP6.42□□□□□ -1.38
SDF2-206ENST00000587788 CA12O43570 354 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 LGR5O75473 907 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 GDF11O95390 407 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 PDHBP11177 359 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 STAT6P42226 847 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 SLC1A4P43007 532 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 AFMP43652 599 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 SERPINB4P48594 390 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 MRPL12P52815 198 aaKnown RBP6.42□□□□□ -1.38
SDF2-206ENST00000587788 SMTNP53814 917 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 NAPAP54920 295 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 TUBB4BP68371 445 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 CAP1Q01518 475 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 ATP2B2Q01814 1243 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 ICA1Q05084 483 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 PPATQ06203 517 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 ZNF543Q08ER8 600 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 CLN3Q13286 438 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 CRHR2Q13324 411 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 TUBB2AQ13885 445 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 SEPT2Q15019 361 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 EARS2Q5JPH6 523 aaKnown RBP6.42□□□□□ -1.38
SDF2-206ENST00000587788 RRAGBQ5VZM2 374 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 E4F1Q66K89 784 aaPredicted RBP6.42□□□□□ -1.38
SDF2-206ENST00000587788 SLFN13Q68D06 897 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 WWC2Q6AWC2 1192 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 BTNL9Q6UXG8 535 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 HEATR3Q7Z4Q2 680 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 CNGA4Q8IV77 575 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 TNS4Q8IZW8 715 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 CYP4X1Q8N118 509 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 STAG2Q8N3U4 1231 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 ANKRD7Q92527 254 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 LPAR1Q92633 364 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 IQCDQ96DY2 449 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 ERO1AQ96HE7 468 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 PPP1R13BQ96KQ4 1090 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 BAG1Q99933 345 aaPredicted RBP6.42□□□□□ -1.38
SDF2-206ENST00000587788 HINFPQ9BQA5 517 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 WDR18Q9BV38 432 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 TUBB2BQ9BVA1 445 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 TSPAN10Q9H1Z9 355 aaPredicted RBP6.42□□□□□ -1.38
SDF2-206ENST00000587788 ZFAND3Q9H8U3 227 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 PICK1Q9NRD5 415 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 SCHIP1Q9P0W5 487 aaPredicted RBP6.42□□□□□ -1.38
SDF2-206ENST00000587788 CGNQ9P2M7 1197 aaKnown RBP6.42□□□□□ -1.38
SDF2-206ENST00000587788 LIMA1Q9UHB6 759 aaKnown RBP6.42□□□□□ -1.38
SDF2-206ENST00000587788 KCNH4Q9UQ05 1017 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 ZHX2Q9Y6X8 837 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 ITIH6Q6UXX5 1313 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 PHLPP2Q6ZVD8 1323 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 SYNRGQ9UMZ2 1314 aa6.42□□□□□ -1.38
SDF2-206ENST00000587788 RBBP6Q7Z6E9 1792 aaKnown RBP6.41□□□□□ -1.38
SDF2-206ENST00000587788 MYH6P13533 1939 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 A0A087X0B3 334 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 TTC24A2A3L6 582 aaPredicted RBP6.41□□□□□ -1.38
SDF2-206ENST00000587788 SMCO2A6NFE2 343 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 A6NJY4 79 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 TNFRSF10AO00220 468 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 CYTH3O43739 400 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 RGS20O76081 388 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 SLU7O95391 586 aaKnown RBP6.41□□□□□ -1.38
SDF2-206ENST00000587788 ZIC2O95409 532 aaPredicted RBP6.41□□□□□ -1.38
SDF2-206ENST00000587788 RPN1P04843 607 aaKnown RBP6.41□□□□□ -1.38
SDF2-206ENST00000587788 OR52Z1P0C646 297 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 BMP3P12645 472 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 EEF1GP26641 437 aaKnown RBP6.41□□□□□ -1.38
SDF2-206ENST00000587788 GTF2A2P52657 109 aa6.41□□□□□ -1.38
SDF2-206ENST00000587788 WDR4P57081 412 aaKnown RBP6.41□□□□□ -1.38
SDF2-206ENST00000587788 ETF1P62495 437 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms