RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 INPP5BP32019 993 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 SPDYCQ5MJ68 293 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 MAATS1Q7Z4T9 603 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 DEFB132Q7Z7B7 95 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 SUGP1Q8IWZ8 645 aaKnown RBP20.32■□□□□ 0.84
DDX39A-206ENST00000587730 LRRC57Q8N9N7 239 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 CCDC26Q8TAB7 109 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 GPR101Q96P66 508 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-206ENST00000587730 TBC1D7Q9P0N9 293 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 USP17L10C9JJH3 530 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 GCOM1H8Y6P7 765 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-206ENST00000587730 RAD51CO43502 376 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 PPP1R37O75864 691 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 APBA3O96018 575 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 CCDC172P0C7W6 258 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 MYZAPP0CAP1 466 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 SHMT1P34896 483 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 PICALMQ13492 652 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 NFIL3Q16649 462 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 ICE2Q659A1 982 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 ALKBH5Q6P6C2 394 aaKnown RBP20.31■□□□□ 0.84
DDX39A-206ENST00000587730 SLFN11Q7Z7L1 901 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 PACS2Q86VP3 889 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 MKL1Q969V6 931 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 ZFP91Q96JP5 570 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-206ENST00000587730 PLEKHA4Q9H4M7 779 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 TNS1Q9HBL0 1735 aaKnown RBP20.31■□□□□ 0.84
DDX39A-206ENST00000587730 KIF13BQ9NQT8 1826 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 PCDHA1Q9Y5I3 950 aa20.31■□□□□ 0.84
DDX39A-206ENST00000587730 BHMG1C9JSJ3 638 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-206ENST00000587730 KRT14P02533 472 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 H2AFZP0C0S5 128 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 LSP1P33241 339 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 ARID5AQ03989 594 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 GIT2Q14161 759 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 MMS22LQ6ZRQ5 1243 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 H2AFVQ71UI9 128 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 RASGEF1CQ8N431 466 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 PIK3R5Q8WYR1 880 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 TTC7AQ9ULT0 858 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-206ENST00000587730 NENFQ9UMX5 172 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 MYH10P35580 1976 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 FAM153BP0C7A2 387 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 PON1P27169 355 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 MDH1P40925 334 aaKnown RBP20.3■□□□□ 0.84
DDX39A-206ENST00000587730 TRAF1Q13077 416 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 FAM153CQ494X1 144 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 ARSHQ5FYA8 562 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 HHIPL2Q6UWX4 724 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 ZNF571Q7Z3V5 609 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-206ENST00000587730 MICALL1Q8N3F8 863 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 ETNPPLQ8TBG4 499 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 HINFPQ9BQA5 517 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 TMBIM4Q9HC24 238 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 NYAP2Q9P242 653 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 FAM153AQ9UHL3 310 aa20.3■□□□□ 0.84
DDX39A-206ENST00000587730 C6orf229H3BNL8 230 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 TBCAO75347 108 aaKnown RBP20.29■□□□□ 0.84
DDX39A-206ENST00000587730 MED24O75448 989 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 ERCC3P19447 782 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 EIF6P56537 245 aaKnown RBP20.29■□□□□ 0.84
DDX39A-206ENST00000587730 ARHGAP4P98171 946 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 PDCLQ13371 301 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 HLTFQ14527 1009 aaKnown RBP eCLIP20.29■□□□□ 0.84
DDX39A-206ENST00000587730 EPHA7Q15375 998 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 QRICH1Q2TAL8 776 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 TTBK2Q6IQ55 1244 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 DPY19L2P1Q6NXN4 242 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-206ENST00000587730 PEX26Q7Z412 305 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 TPCN2Q8NHX9 752 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 CRYGNQ8WXF5 182 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 NAP1L3Q99457 506 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-206ENST00000587730 POLR3CQ9BUI4 534 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-206ENST00000587730 FGFBP2Q9BYJ0 223 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 ZHX3Q9H4I2 956 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 OLFML3Q9NRN5 406 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 POLLQ9UGP5 575 aa20.29■□□□□ 0.84
DDX39A-206ENST00000587730 UBE4BO95155 1302 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 EIF3DO15371 548 aaKnown RBP eCLIP20.28■□□□□ 0.84
DDX39A-206ENST00000587730 CEP104O60308 925 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 LMNB1P20700 586 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 GUCY2FP51841 1108 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 CDR1P51861 262 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 JAM2P57087 298 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 GTF2IP78347 998 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 MRPS25P82663 173 aaKnown RBP20.28■□□□□ 0.84
DDX39A-206ENST00000587730 SPIRE1Q08AE8 756 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 DRP2Q13474 957 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 ARMC9Q7Z3E5 817 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 MKNK1Q9BUB5 465 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 PACSIN1Q9BY11 444 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 KANSL2Q9H9L4 492 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 FAM114A2Q9NRY5 505 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 USP40Q9NVE5 1235 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 PLAAQ9Y263 795 aa20.28■□□□□ 0.84
DDX39A-206ENST00000587730 GREB1LQ9C091 1923 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-206ENST00000587730 MEFVO15553 781 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms