RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 TPH2Q8IWU9 490 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 KIAA0895Q8NCT3 520 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 ENOX1Q8TC92 643 aaKnown RBP11.33□□□□□ -0.6
APOC1-201ENST00000586638 GPRASP2Q96D09 838 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 DNAJC19Q96DA6 116 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 INPP4AQ96PE3 977 aaPredicted RBP11.33□□□□□ -0.6
APOC1-201ENST00000586638 MMP19Q99542 508 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 LXNQ9BS40 222 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 MAF1Q9H063 256 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 C11orf49Q9H6J7 331 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 FANCLQ9NW38 375 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 IFNKQ9P0W0 207 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 WRAP73Q9P2S5 460 aaPredicted RBP11.33□□□□□ -0.6
APOC1-201ENST00000586638 MAPK8IP1Q9UQF2 711 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 TRIM49BA6NDI0 452 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 RGS20O76081 388 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 EYA4O95677 639 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 KRT18P05783 430 aaKnown RBP11.32□□□□□ -0.6
APOC1-201ENST00000586638 PGK2P07205 417 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 SYN1P17600 705 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 CYP2B6P20813 491 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 UGCGQ16739 394 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 CNNM4Q6P4Q7 775 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.32□□□□□ -0.6
APOC1-201ENST00000586638 ADSSL1Q8N142 457 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 DEFB123Q8N688 67 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 SYT2Q8N9I0 419 aaPredicted RBP11.32□□□□□ -0.6
APOC1-201ENST00000586638 GIMAP8Q8ND71 665 aaPredicted RBP11.32□□□□□ -0.6
APOC1-201ENST00000586638 DNERQ8NFT8 737 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 NEK9Q8TD19 979 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 PIGOQ8TEQ8 1089 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 GTF3C2Q8WUA4 911 aaPredicted RBP11.32□□□□□ -0.6
APOC1-201ENST00000586638 TRIM44Q96DX7 344 aaPredicted RBP11.32□□□□□ -0.6
APOC1-201ENST00000586638 FGD4Q96M96 766 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 HSD17B14Q9BPX1 270 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 RUSC1Q9BVN2 902 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 FGFBP2Q9BYJ0 223 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 LRRC27Q9C0I9 530 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 PORCNQ9H237 461 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 SLC39A2Q9NP94 309 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 TCEAL9Q9UHQ7 104 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 DNM3Q9UQ16 869 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 ZNF236Q9UL36 1845 aa11.32□□□□□ -0.6
APOC1-201ENST00000586638 MYH9P35579 1960 aaKnown RBP11.32□□□□□ -0.6
APOC1-201ENST00000586638 PVALEFA0A1B0GWK0 134 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 ZBTB39O15060 712 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 SLITRK3O94933 977 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 CCNE2O96020 404 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 KCNA2P16389 499 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 ZNF18P17022 549 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 CDC25BP30305 580 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
APOC1-201ENST00000586638 STK4Q13043 487 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 STIM1Q13586 685 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 ARSHQ5FYA8 562 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
APOC1-201ENST00000586638 SPATA1Q5VX52 437 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.31□□□□□ -0.6
APOC1-201ENST00000586638 SHCBP1Q8NEM2 672 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 XPO4Q9C0E2 1151 aaKnown RBP11.31□□□□□ -0.6
APOC1-201ENST00000586638 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
APOC1-201ENST00000586638 TBC1D22BQ9NU19 505 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 PANK4Q9NVE7 773 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 MORF4L1Q9UBU8 362 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 RWDD2AQ9UIY3 292 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 OGDHLQ9ULD0 1010 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 SAMM50Q9Y512 469 aa11.31□□□□□ -0.6
APOC1-201ENST00000586638 WDR64B1ANS9 1081 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 RSPH10B2B2RC85 870 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 STAM2O75886 525 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 RSPH10BP0C881 870 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 XRCC5P13010 732 aaKnown RBP11.3□□□□□ -0.6
APOC1-201ENST00000586638 EDNRBP24530 442 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 MAGEA10P43363 369 aaPredicted RBP11.3□□□□□ -0.6
APOC1-201ENST00000586638 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
APOC1-201ENST00000586638 JAK3P52333 1124 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 KRT76Q01546 638 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 SP4Q02446 784 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 EHHADHQ08426 723 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 KCTD2Q14681 263 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 STXBP2Q15833 593 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 TPD52L1Q16890 204 aaPredicted RBP11.3□□□□□ -0.6
APOC1-201ENST00000586638 LRIT3Q3SXY7 679 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 GNPTABQ3T906 1256 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 FAM26FQ5R3K3 315 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 SEPT14Q6ZU15 432 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 SFR1Q86XK3 245 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 GLIS3Q8NEA6 775 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 GPRC5AQ8NFJ5 357 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 MRFAP1L1Q96HT8 127 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 IWS1Q96ST2 819 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 ZHX3Q9H4I2 956 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 BCAS3Q9H6U6 928 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 TBC1D7Q9P0N9 293 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 TELO2Q9Y4R8 837 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms