RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 NNTQ13423 1086 aa20.21■□□□□ 0.83
CACTIN-204ENST00000585942 DCAF17Q5H9S7 520 aaPredicted RBP20.21■□□□□ 0.83
CACTIN-204ENST00000585942 SFR1Q86XK3 245 aa20.21■□□□□ 0.83
CACTIN-204ENST00000585942 IQCKQ8N0W5 287 aa20.21■□□□□ 0.83
CACTIN-204ENST00000585942 RBM46Q8TBY0 533 aaKnown RBP20.21■□□□□ 0.83
CACTIN-204ENST00000585942 REEP2Q9BRK0 252 aa20.21■□□□□ 0.83
CACTIN-204ENST00000585942 LUC7LQ9NQ29 371 aaKnown RBP20.21■□□□□ 0.83
CACTIN-204ENST00000585942 TAF1LQ8IZX4 1826 aa20.21■□□□□ 0.83
CACTIN-204ENST00000585942 EEF2P13639 858 aaKnown RBP20.2■□□□□ 0.82
CACTIN-204ENST00000585942 UCHL3P15374 230 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 TNFRSF8P28908 595 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 CNPY4Q8N129 248 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 PIK3R5Q8WYR1 880 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 SPAG5Q96R06 1193 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 KCNQ5Q9NR82 932 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 SWAP70Q9UH65 585 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 AJAP1Q9UKB5 411 aaPredicted RBP20.2■□□□□ 0.82
CACTIN-204ENST00000585942 SAMM50Q9Y512 469 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 EIF3HO15372 352 aaKnown RBP eCLIP20.2■□□□□ 0.82
CACTIN-204ENST00000585942 AKAP3O75969 853 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 SPATA31C1P0DKV0 1188 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 CASP4P49662 377 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 SETQ01105 290 aaPredicted RBP20.2■□□□□ 0.82
CACTIN-204ENST00000585942 CDC37Q16543 378 aaPredicted RBP20.2■□□□□ 0.82
CACTIN-204ENST00000585942 USH1GQ495M9 461 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 TCERG1LQ5VWI1 586 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 APOBEC3HQ6NTF7 200 aaKnown RBP20.2■□□□□ 0.82
CACTIN-204ENST00000585942 GJB7Q6PEY0 223 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 CYP2W1Q8TAV3 490 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 RNF14Q9UBS8 474 aa20.2■□□□□ 0.82
CACTIN-204ENST00000585942 SRCAPQ6ZRS2 3230 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 FRMD3A2A2Y4 597 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 SFI1A8K8P3 1242 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 SCP2P22307 547 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 ARHGAP4P98171 946 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 CFAP58Q5T655 872 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 ARMCX3Q9UH62 379 aaPredicted RBP20.19■□□□□ 0.82
CACTIN-204ENST00000585942 CCDC189A1A4V9 331 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 FAM86B1E9PN63 330 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 CLIC2O15247 247 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 FAM86B2P0C5J1 330 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 EPB41P11171 864 aaKnown RBP20.19■□□□□ 0.82
CACTIN-204ENST00000585942 PON1P27169 355 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 POLD1P28340 1107 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 USP11P51784 963 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 USP38Q8NB14 1042 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 CAPN7Q9Y6W3 813 aa20.19■□□□□ 0.82
CACTIN-204ENST00000585942 MYH4Q9Y623 1939 aa20.18■□□□□ 0.82
CACTIN-204ENST00000585942 KNOP1Q1ED39 458 aaKnown RBP20.18■□□□□ 0.82
CACTIN-204ENST00000585942 EDRF1Q3B7T1 1238 aa20.18■□□□□ 0.82
CACTIN-204ENST00000585942 ETNPPLQ8TBG4 499 aa20.18■□□□□ 0.82
CACTIN-204ENST00000585942 AP1M1Q9BXS5 423 aa20.18■□□□□ 0.82
CACTIN-204ENST00000585942 FOCADQ5VW36 1801 aa20.18■□□□□ 0.82
CACTIN-204ENST00000585942 DDX42Q86XP3 938 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACTIN-204ENST00000585942 ZC3H3Q8IXZ2 948 aaKnown RBP20.18■□□□□ 0.82
CACTIN-204ENST00000585942 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
CACTIN-204ENST00000585942 GIMAP7Q8NHV1 300 aa20.18■□□□□ 0.82
CACTIN-204ENST00000585942 ZC3H12CQ9C0D7 883 aaKnown RBP20.18■□□□□ 0.82
CACTIN-204ENST00000585942 ZEB2O60315 1214 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 HOXA10P31260 410 aaPredicted RBP20.17■□□□□ 0.82
CACTIN-204ENST00000585942 PAK2Q13177 524 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 RPS6KA1Q15418 735 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 EXOC3L4Q17RC7 722 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 RPAINQ86UA6 219 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 NAGPAQ9UK23 515 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 USP21Q9UK80 565 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 DNM3Q9UQ16 869 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 MYO1FO00160 1098 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 PPEF1O14829 653 aaPredicted RBP20.17■□□□□ 0.82
CACTIN-204ENST00000585942 HLA-DOAP06340 250 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 HOXA7P31268 230 aaPredicted RBP20.17■□□□□ 0.82
CACTIN-204ENST00000585942 SLFN13Q68D06 897 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 ALKBH5Q6P6C2 394 aaKnown RBP20.17■□□□□ 0.82
CACTIN-204ENST00000585942 CABS1Q96KC9 395 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 COA1Q9GZY4 146 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 CYP3A7-CYP3A51PA0A087WV96 503 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 H0YHG0 523 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 CEP104O60308 925 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 AFPP02771 609 aaKnown RBP20.17■□□□□ 0.82
CACTIN-204ENST00000585942 CYP3A7P24462 503 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 HOXA13P31271 388 aaPredicted RBP20.17■□□□□ 0.82
CACTIN-204ENST00000585942 LENG9Q96B70 501 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 BHMT2Q9H2M3 363 aa20.17■□□□□ 0.82
CACTIN-204ENST00000585942 ADAMTSL1Q8N6G6 1762 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 SHTN1A0MZ66 631 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 DDTLA6NHG4 134 aaPredicted RBP20.16■□□□□ 0.82
CACTIN-204ENST00000585942 XRCC5P13010 732 aaKnown RBP20.16■□□□□ 0.82
CACTIN-204ENST00000585942 GUCY1A3Q02108 690 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 SIAH1Q8IUQ4 282 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 SLFN12Q8IYM2 578 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 TAF4BQ92750 862 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 RNPC3Q96LT9 517 aaKnown RBP20.16■□□□□ 0.82
CACTIN-204ENST00000585942 RGL1Q9NZL6 768 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 TRAF3IP3Q9Y228 551 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 PCDHB13Q9Y5F0 798 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 PITPNM2Q9BZ72 1349 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 KIF4AO95239 1232 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 ERVK-9P63128 1117 aa20.16■□□□□ 0.82
CACTIN-204ENST00000585942 SYT2Q8N9I0 419 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms