RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 NOD1Q9Y239 953 aa13.07□□□□□ -0.32
LRFN3-202ENST00000585876 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
LRFN3-202ENST00000585876 PCDHB6Q9Y5E3 794 aa13.07□□□□□ -0.32
LRFN3-202ENST00000585876 UMODL1Q5DID0 1318 aa13.07□□□□□ -0.32
LRFN3-202ENST00000585876 PTPRSQ13332 1948 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
LRFN3-202ENST00000585876 TREHO43280 583 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 STX6O43752 255 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 STBD1O95210 358 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 OATP04181 439 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 INSRRP14616 1297 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 RFC2P35250 354 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
LRFN3-202ENST00000585876 PRKCEQ02156 737 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 FPGSQ05932 587 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 RESTQ13127 1097 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 ZNF484Q5JVG2 852 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 TAF2Q6P1X5 1199 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 TRAF7Q6Q0C0 670 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 BADQ92934 168 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 WNT8BQ93098 351 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 GBF1Q92538 1859 aa13.06□□□□□ -0.32
LRFN3-202ENST00000585876 CHD7Q9P2D1 2997 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 PARNO95453 639 aaKnown RBP13.05□□□□□ -0.32
LRFN3-202ENST00000585876 CKBP12277 381 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 CYP2C18P33260 490 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 QARSP47897 775 aaKnown RBP13.05□□□□□ -0.32
LRFN3-202ENST00000585876 PSMC5P62195 406 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 ZNF200P98182 395 aaPredicted RBP13.05□□□□□ -0.32
LRFN3-202ENST00000585876 ATP2C1P98194 919 aaPredicted RBP13.05□□□□□ -0.32
LRFN3-202ENST00000585876 PTGDRQ13258 359 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 NBR1Q14596 966 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 EPHA7Q15375 998 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 ZNF174Q15697 407 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 TMEM199Q8N511 208 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 VWCEQ96DN2 955 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 HSD17B14Q9BPX1 270 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 NIFKQ9BYG3 293 aaKnown RBP13.05□□□□□ -0.32
LRFN3-202ENST00000585876 PPP1R12CQ9BZL4 782 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 CEP131Q9UPN4 1083 aa13.05□□□□□ -0.32
LRFN3-202ENST00000585876 SZT2Q5T011 3432 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 POTEMA6NI47 508 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 MARCH6O60337 910 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 DKC1O60832 514 aaKnown RBP eCLIP13.04□□□□□ -0.32
LRFN3-202ENST00000585876 LYPLA2O95372 231 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 C22orf31O95567 290 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
LRFN3-202ENST00000585876 HSP90AA1P07900 732 aaKnown RBP13.04□□□□□ -0.32
LRFN3-202ENST00000585876 PFKMP08237 780 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 SELPP16109 830 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 ATP2B1P20020 1258 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 TXKP42681 527 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 MDM2Q00987 491 aaPredicted RBP13.04□□□□□ -0.32
LRFN3-202ENST00000585876 PPIGQ13427 754 aaKnown RBP eCLIP13.04□□□□□ -0.32
LRFN3-202ENST00000585876 TARBP2Q15633 366 aaKnown RBP13.04□□□□□ -0.32
LRFN3-202ENST00000585876 XKR3Q5GH77 459 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 LRRC8DQ7L1W4 858 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 C4orf19Q8IY42 314 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 IGSF22Q8N9C0 903 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 CEP89Q96ST8 783 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
LRFN3-202ENST00000585876 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 PPME1Q9Y570 386 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 PCDHA2Q9Y5H9 948 aa13.04□□□□□ -0.32
LRFN3-202ENST00000585876 MORC2Q9Y6X9 1032 aaPredicted RBP13.04□□□□□ -0.32
LRFN3-202ENST00000585876 TCHHQ07283 1943 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 SMIM35A0A1B0GVV1 85 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 BMP15O95972 392 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 IQCF3P0C7M6 154 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 CSF2RAP15509 400 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 BECN1Q14457 450 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 PDIA5Q14554 519 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 FAM26DQ5JW98 314 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 ARL6IP4Q66PJ3 421 aaKnown RBP13.03□□□□□ -0.32
LRFN3-202ENST00000585876 NCAPH2Q6IBW4 605 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 MTHFD1LQ6UB35 978 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 RUFY4Q6ZNE9 571 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 ANO5Q75V66 913 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 FERMT3Q86UX7 667 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 CKAP2LQ8IYA6 745 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 LINC01465Q8N7H1 131 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 BANK1Q8NDB2 785 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 EIF2AK1Q9BQI3 630 aaKnown RBP13.03□□□□□ -0.32
LRFN3-202ENST00000585876 LXNQ9BS40 222 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 ZSWIM4Q9H7M6 989 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
LRFN3-202ENST00000585876 WRAP73Q9P2S5 460 aaPredicted RBP13.03□□□□□ -0.32
LRFN3-202ENST00000585876 COLQQ9Y215 455 aaPredicted RBP13.03□□□□□ -0.32
LRFN3-202ENST00000585876 SLITRK3O94933 977 aa13.02□□□□□ -0.33
LRFN3-202ENST00000585876 CXCL10P02778 98 aa13.02□□□□□ -0.33
LRFN3-202ENST00000585876 MUTP22033 750 aa13.02□□□□□ -0.33
LRFN3-202ENST00000585876 EPHB4P54760 987 aa13.02□□□□□ -0.33
LRFN3-202ENST00000585876 MBTPS1Q14703 1052 aa13.02□□□□□ -0.33
LRFN3-202ENST00000585876 GPNMBQ14956 572 aa13.02□□□□□ -0.33
LRFN3-202ENST00000585876 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
LRFN3-202ENST00000585876 RASIP1Q5U651 963 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms