RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PURAQ00577 322 aaKnown RBP14.14□□□□□ -0.15
VMP1-202ENST00000585847 AMPD3Q01432 767 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 GNASQ5JWF2 1037 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 ZNF746Q6NUN9 644 aaPredicted RBP14.14□□□□□ -0.15
VMP1-202ENST00000585847 NECAB2Q7Z6G3 386 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 RASSF8Q8NHQ8 419 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 SEPT1Q8WYJ6 367 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 PAWRQ96IZ0 340 aaKnown RBP14.14□□□□□ -0.15
VMP1-202ENST00000585847 PRO3102Q9H379 93 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 TTC12Q9H892 705 aaPredicted RBP14.14□□□□□ -0.15
VMP1-202ENST00000585847 ANO10Q9NW15 660 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 RMND1Q9NWS8 449 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 KIAA1468Q9P260 1216 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 DACH1Q9UI36 760 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 PHF24Q9UPV7 400 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 GRIN2DO15399 1336 aa14.14□□□□□ -0.15
VMP1-202ENST00000585847 ALPK3Q96L96 1907 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
VMP1-202ENST00000585847 POTEMA6NI47 508 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 HAS3O00219 553 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 DNM1LO00429 736 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 LGALS2P05162 132 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 ASGR1P07306 291 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 SUPT20HL2P0C7V6 817 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 COL6A1P12109 1028 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 ATP4AP20648 1035 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 TCF7P36402 384 aaPredicted RBP14.13□□□□□ -0.15
VMP1-202ENST00000585847 CPT1AP50416 773 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 KRT76Q01546 638 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 HYIQ5T013 277 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 NT5DC1Q5TFE4 455 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 RNF180Q86T96 592 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 TRIM50Q86XT4 487 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 CCDC60Q8IWA6 550 aaPredicted RBP14.13□□□□□ -0.15
VMP1-202ENST00000585847 RDM1Q8NG50 284 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 CDK5RAP3Q96JB5 506 aa14.13□□□□□ -0.15
VMP1-202ENST00000585847 TSEN34Q9BSV6 310 aaKnown RBP14.13□□□□□ -0.15
VMP1-202ENST00000585847 POLR2DO15514 142 aaKnown RBP14.12□□□□□ -0.15
VMP1-202ENST00000585847 CHMP2AO43633 222 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 PPFIA4O75335 1185 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 STBD1O95210 358 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 MYL3P08590 195 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 ZNF286BP0CG31 522 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 PPP1R2P41236 205 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 STAT6P42226 847 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 TECP42680 631 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 ACLYP53396 1101 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 POSTNQ15063 836 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 UGCGQ16739 394 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 CXCL17Q6UXB2 119 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 CABP7Q86V35 215 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 ANKLE1Q8NAG6 615 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 ARRDC4Q8NCT1 418 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 PPP1R13LQ8WUF5 828 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 ANP32BQ92688 251 aaKnown RBP14.12□□□□□ -0.15
VMP1-202ENST00000585847 CCDC47Q96A33 483 aaKnown RBP14.12□□□□□ -0.15
VMP1-202ENST00000585847 GSDMAQ96QA5 445 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 SPC25Q9HBM1 224 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 WRAP73Q9P2S5 460 aaPredicted RBP14.12□□□□□ -0.15
VMP1-202ENST00000585847 TUBE1Q9UJT0 475 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 EMSYQ7Z589 1322 aa14.12□□□□□ -0.15
VMP1-202ENST00000585847 A0A1W2PQ45 241 aaPredicted RBP14.11□□□□□ -0.15
VMP1-202ENST00000585847 A0A1W2PQY0 241 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 MOXD2PA6NHM9 499 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 WDR64B1ANS9 1081 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 DLL1O00548 723 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 ACTN4O43707 911 aaKnown RBP14.11□□□□□ -0.15
VMP1-202ENST00000585847 ZNF862O60290 1169 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 F2P00734 622 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
VMP1-202ENST00000585847 TYRO3Q06418 890 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 HIC1Q14526 733 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 EPHA7Q15375 998 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 E2F4Q16254 413 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 ECM1Q16610 540 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 DGKDQ16760 1214 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 UVSSAQ2YD98 709 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 UTP14CQ5TAP6 766 aaKnown RBP14.11□□□□□ -0.15
VMP1-202ENST00000585847 RRAGBQ5VZM2 374 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 NCAPH2Q6IBW4 605 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 SMAP1Q8IYB5 467 aaPredicted RBP14.11□□□□□ -0.15
VMP1-202ENST00000585847 C7orf61Q8IZ16 206 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 PCSK9Q8NBP7 692 aaKnown RBP14.11□□□□□ -0.15
VMP1-202ENST00000585847 SPATA20Q8TB22 786 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 AFAP1L1Q8TED9 768 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 BPIFA3Q9BQP9 254 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 FUCA2Q9BTY2 467 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 MMTAG2Q9BU76 263 aaKnown RBP14.11□□□□□ -0.15
VMP1-202ENST00000585847 PCDHA10Q9Y5I2 948 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 IGSF9BQ9UPX0 1349 aa14.11□□□□□ -0.15
VMP1-202ENST00000585847 PP2D1A8MPX8 630 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 NOP56O00567 594 aaKnown RBP14.1□□□□□ -0.15
VMP1-202ENST00000585847 DKC1O60832 514 aaKnown RBP eCLIP14.1□□□□□ -0.15
VMP1-202ENST00000585847 SPATA31C1P0DKV0 1188 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 CDC25AP30304 524 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 SFNP31947 248 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 JAK3P52333 1124 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 PSMC6P62333 389 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 SWSAP1Q6NVH7 229 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 CNNM4Q6P4Q7 775 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms