RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	UIMC1	Q96RL1	719 aa		18.7	■□□□□ 0.58
CIRBP-204	ENST00000585630	IFIH1	Q9BYX4	1025 aa	Known RBP	18.7	■□□□□ 0.58
CIRBP-204	ENST00000585630	ZNF302	Q9NR11	478 aa		18.7	■□□□□ 0.58
CIRBP-204	ENST00000585630	IGSF9B	Q9UPX0	1349 aa		18.7	■□□□□ 0.58
CIRBP-204	ENST00000585630	LCHN	A4D1U4	455 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	MSH4	O15457	936 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	HBP1	O60381	514 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	CTDNEP1	O95476	244 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	SEC24B	O95487	1268 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	AMH	P03971	560 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	MRPS6	P82932	125 aa	Known RBP	18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	PDXDC2P	Q6P474	469 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	18.69	■□□□□ 0.58	2e-8	■□□□□ 8.6
CIRBP-204	ENST00000585630	USP38	Q8NB14	1042 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	GTF3C6	Q969F1	213 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	ZBED2	Q9BTP6	218 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	PHF20	Q9BVI0	1012 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	PCDHA2	Q9Y5H9	948 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	CDY2A	Q9Y6F7	541 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	TTC3	P53804	2025 aa		18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	PRRC2B	Q5JSZ5	2229 aa	Known RBP	18.69	■□□□□ 0.58
CIRBP-204	ENST00000585630	LARGE1	O95461	756 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	GHR	P10912	638 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	LPIN1	Q14693	890 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	MOXD1	Q6UVY6	613 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	KRT25	Q7Z3Z0	450 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	MYOCD	Q8IZQ8	938 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	SLC5A5	Q92911	643 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	RIT2	Q99578	217 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	RAD9A	Q99638	391 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	FAM49A	Q9H0Q0	323 aa	Predicted RBP	18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	KCNJ14	Q9UNX9	436 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	PCDHA10	Q9Y5I2	948 aa		18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	MAFB	Q9Y5Q3	323 aa	Predicted RBP	18.68	■□□□□ 0.58
CIRBP-204	ENST00000585630	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	SMIM35	A0A1B0GVV1	85 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	WDR64	B1ANS9	1081 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	TDP2	O95551	362 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	PSAP	P07602	524 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	XBP1	P17861	261 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	IGFBP4	P22692	258 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	CYP3A7	P24462	503 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	NONO	Q15233	471 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	ME3	Q16798	604 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630		Q4G0T1	1027 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	FBXO47	Q5MNV8	452 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	LRCH2	Q5VUJ6	765 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	SWSAP1	Q6NVH7	229 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	MTHFD1L	Q6UB35	978 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	TSHZ1	Q6ZSZ6	1077 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	MBOAT7	Q96N66	472 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	ORC3	Q9UBD5	711 aa	Predicted RBP	18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	ARID2	Q68CP9	1835 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	KIAA1671	Q9BY89	1806 aa		18.67	■□□□□ 0.58
CIRBP-204	ENST00000585630	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	EPOP	A6NHQ4	379 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	ZBTB42	B2RXF5	422 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	GAS7	O60861	476 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	ATP4A	P20648	1035 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	NEK4	P51957	841 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	HTRA4	P83105	476 aa	Predicted RBP	18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	IER5	Q5VY09	327 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	SPRED2	Q7Z698	418 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	BBX	Q8WY36	941 aa	Predicted RBP	18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	WASF1	Q92558	559 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	TEKT3	Q9BXF9	490 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	SAMM50	Q9Y512	469 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	TRPV2	Q9Y5S1	764 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	SQOR	Q9Y6N5	450 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	KDM3A	Q9Y4C1	1321 aa		18.66	■□□□□ 0.58
CIRBP-204	ENST00000585630	ATG2A	Q2TAZ0	1938 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630		M0QZ92	97 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	DTNB	O60941	627 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	SFN	P31947	248 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	JAK3	P52333	1124 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	INF2	Q27J81	1249 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	C8orf34	Q49A92	452 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	ZNF484	Q5JVG2	852 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	FAM117B	Q6P1L5	589 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	CKAP2L	Q8IYA6	745 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	NECAB1	Q8N987	351 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	ETNPPL	Q8TBG4	499 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	SP7	Q8TDD2	431 aa	Predicted RBP	18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	PPM1E	Q8WY54	764 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	ARNTL2	Q8WYA1	636 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	FAM167A	Q96KS9	214 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	CERS4	Q9HA82	394 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	DISC1	Q9NRI5	854 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	GJB4	Q9NTQ9	266 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	GABBR1	Q9UBS5	961 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	INSL6	Q9Y581	213 aa		18.65	■□□□□ 0.58
CIRBP-204	ENST00000585630	CCDC194	A0A1B0GVG4	234 aa		18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	LINC01553	A4QN01	128 aa		18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	PSMD10	O75832	226 aa		18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	C22orf31	O95567	290 aa		18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	FDPS	P14324	419 aa	Known RBP	18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	POU3F3	P20264	500 aa	Predicted RBP	18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	KLRC1	P26715	233 aa		18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	NSUN7	Q8NE18	718 aa	Known RBP	18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	RDM1	Q8NG50	284 aa		18.64	■□□□□ 0.57

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